Colletotrichum lupini: CLUP02_06246
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Entry
CLUP02_06246 CDS
T08561
Name
(RefSeq) VHS domain-containing protein
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
clup
Colletotrichum lupini
Pathway
clup04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
CLUP02_06246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clup04131
]
CLUP02_06246
Membrane trafficking [BR:
clup04131
]
Endosome - Golgi transport
Others
GGA
CLUP02_06246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
GAT
Alpha_adaptinC2
GGA_N-GAT
DUF8042
MamY_C
Motif
Other DBs
NCBI-GeneID:
73340256
NCBI-ProteinID:
XP_049142389
UniProt:
A0A9Q8SNT8
LinkDB
All DBs
Position
3:join(4996670..4997215,4997272..4997947,4998012..4998520,4998574..4998780)
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AA seq
645 aa
AA seq
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MEAASARAAARDRWGEMGAPTPSQLQRFIQAACSPENYEPNLALNLEISDLINSKKGSAP
REAAVAIVSYINHRNPNVALLAINLLDICVKNCGYPFHLQISTKEFLNELVRRFPERPPI
RATRVQMKILEAIEEWRSTICETSRYKEDLGFIRDMHRLLSYKGYTFPEVRRDDAAVLNP
SDNLKSAEEMEEEEREAQSAKLQELIRRGTPEDLQEANRLMKIMAGYDTRSKTDYRAKAA
QEVAKIQAKARLLEERLEAFQQGDTMQDGDVFSELAAALSSAQPKIQKMCEEESDDHEAV
AKLLEINDSIHRTVERYKFMKKGDLEAAKKVASGAPLPSTSGPSKSAAQELSLIDFDGEP
ETTNGSSSSQPASQSAGIENDLLGLSMDDSASYGQGGALTLGFGANSRPALLSSVTENNS
AKGPMSNTATPQPPSFSQFASFTSPSASQSGTPQPSGMSAFKPPQQQATTSNDPFAALGS
PIFSSKPATPAPAPAIAPAPAAPAANDDDEWAFSSALPPEAPSQPKEHKATVSDSTVKIE
MIAGRTGTGNAINLSFAFSNNSAQPISELHYQLAATKGYELGLRPQTGRELAPKQSRGVT
QFVEVWHAGDKNRKVQSIKLRWRISYKVGAEAKNEMGEITEFSLA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgcatcagccagagctgcggcccgagaccgctggggcgaaatgggcgctccc
acgccgtctcagctccagcgcttcattcaggccgcctgcagtcccgagaattacgagccg
aacctcgctctgaatctcgagatttccgacctaatcaattccaagaagggttccgcccca
cgcgaggccgctgtcgccatcgtcagctacatcaaccatcgcaaccccaacgtcgccctc
ctcgcgatcaacctgctcgacatctgcgtcaagaactgcggctaccccttccacctgcag
atcagcacaaaagagtttctcaatgagctcgtcagaaggttccccgagcgacccccgata
cgggcgacgagggttcagatgaagatcctcgaggcgattgaggagtggagaagcacgata
tgcgaaacgagcaggtacaaggaggacttgggcttcattcgggatatgcatcgtcttctg
agctacaaggggtacacgttccccgaggtcaggcgggatgacgccgccgtgctcaaccct
agcgataacttgaaatctgccgaggaaatggaagaagaggaacgcgaggcgcaatctgcc
aagcttcaggagctcattcgacgaggtacacccgaggatctacaggaggcaaaccgcctg
atgaagattatggccggctacgatactcgatccaagaccgactaccgcgccaaggccgct
caggaggttgccaagatccaagccaaggctaggttgctcgaagagagactcgaagctttt
caacagggcgacactatgcaggatggagacgtgttttctgagcttgctgccgctctgtct
agcgcgcaacccaagatccagaaaatgtgtgaagaggagtcggatgaccacgaggccgtc
gcgaagttgctggagatcaatgacagcatacatcggacagtggagcgatacaagttcatg
aagaagggggatcttgaagcagctaagaaggtggccagtggcgcgccgctgccgtcgact
tcaggtccttccaagagcgcagcgcaagagctttctttgatcgactttgatggcgaacca
gagacaacgaatggctcatcgtcaagtcagccggcctcacagtcagcaggcattgagaac
gatcttctcggcctttccatggacgattcagcaagctacggccaaggaggtgctttgact
ctgggattcggagcaaactcgaggccggcgctactctcttccgtgacagaaaacaacagc
gcaaagggacctatgagcaacactgcaacaccccagccaccatccttctcgcagttcgct
tctttcacctctccttcagcatcccagtccggcacaccccagccgtctggtatgtctgcc
tttaagccgccccagcagcaggccacgacctcaaacgacccctttgccgcccttggatcc
cccatcttctcctccaagcctgctaccccagctcccgcccccgccatcgcgcccgcgcca
gcagcgccagccgcaaacgacgacgacgaatgggccttttcgtcagccctccctcctgaa
gcgcctagtcagcctaaggagcacaaggcgactgttagcgattctactgtcaagattgag
atgattgcagggaggacggggacgggcaatgcgatcaaccttagtttcgccttctcgaac
aactctgcgcagcccatctcagagcttcactatcagctcgcggccacaaagggttacgaa
cttggcctccggccccagactgggcgagagttggctcccaagcagagcagaggtgtgacc
cagttcgtagaagtatggcatgctggggacaagaaccgcaaggtgcaatctatcaagttg
cggtggaggatttcttacaaggttggagcggaagcgaagaacgagatgggagagatcacc
gagttcagccttgcatga
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