Colletotrichum lupini: CLUP02_06351
Help
Entry
CLUP02_06351 CDS
T08561
Name
(RefSeq) uncharacterized protein
KO
K08518
syntaxin-binding protein 5
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clup04131
]
CLUP02_06351
Membrane trafficking [BR:
clup04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
CLUP02_06351
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
CLUP02_06351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lgl_C
Beta-prop_IFT140_1st
Beta-prop_EML_2
WD40
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_Prp19
EIF3I
Beta-prop_RIG_2nd
Beta-prop_Nup120_160
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
73340361
NCBI-ProteinID:
XP_049142494
UniProt:
A0A9Q8SP19
LinkDB
All DBs
Position
3:complement(join(5336804..5337534,5337590..5339715,5339789..5339907))
Genome browser
AA seq
991 aa
AA seq
DB search
MAAFLRQKQTGMQNDLSASIIPELFAPDYQSAYGINSQVRPETDWKWCSCLAYDPIQSLL
AIATNESKFGPGKIFVFGQNRVSKVMEPPRHTSFRSIHFTANKLVSLDAKNELGVWDLDT
AKRIAALVCPGQVISMVTDPMLDWAFLGMATGEVLAYDLDRENIARSFRLPNFWKERDPN
ARIVGLVSISLHPRDIGQMLIAYTTGIVIYSFKQNKALKFFEYVLQPGAPGGGGQPADTV
RRPRVTHALWHPTGTFIMTAHEDGSLVFWDPKDGRIIMARTLTEMSVDQSTPNAGHAGYT
EPYGRIAWCCKENPDDTGLLISGGQNPESPQEGLTFIELGQTPIYATSSWQVLQDHLKGK
RQITLPTPPGAQVADFLLIPRSSPYFAGAQDPIAIMTLLTSGELLTMSFPSGYPISPTNQ
LHPSVSFVHPYVNKFAVQTLDRGRWMGMVETRNQGEPLLKGGAETAKPKRRYEGRTIFQI
AHGDSTVRLWDAGHDDEIENPTMLQVDVARALDRYQDIDITTMNMAPNTGEFAVGTRTGE
LVLYRWAGNRFFGKDHHEDLPPNPGALTDISSRAEPGLKEGLQPWQLYEMMQGPITATCV
SDVGFVGVGSEGGFFSVIDLRGPSVIFQISMTEFAQQSKRSSFLKGSHGNAHGKEWPVAI
EFSVMTLEGDNYSSICCFVGTNLGKVATFKLLPSGNSYSVKLAGVQHFDGQVVALCPIQA
DSGRPAFATGPIVAGLRNGQQVNGVLVAVTQTEIRIFKPAGGKGASKTFDDILCDAANVT
EFELHGFAIVGVFGDRTTRAFSIPGLKEIGNAPLPMLDGSRTLSSVVTQTGDIFGWTGPS
EIAVLNVWGTGKDLQISDDILVNPELVTPPRPTISNMQWLSGTQHISPTDLDLLIDPNRP
PSRRMMAAAAAEARAARSAGQPGSNNAGGSNEGWGDYLTRQLNERTEKLNIMSDNMDSLQ
NQSQGWADDVGKYINKQKRNVVLGGLKSKFF
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctttcttcgacaaaagcagacaggcatgcagaatgacctgtctgcgtcaatc
atccccgagctcttcgctcccgattaccagtctgcatacggcatcaactcgcaggttagg
cccgagactgactggaaatggtgcagttgcctagcatacgatccgattcagtcccttctc
gcaattgcgaccaacgagtccaagttcggccccggcaagatcttcgttttcggccaaaac
agagtctccaaggtcatggagccgccaaggcacacatctttccgctctatccacttcacc
gccaataagctcgtctcccttgatgccaagaacgaactgggagtatgggacctcgacact
gcgaagcgcatcgcggctctcgtctgccccggtcaggtcatctccatggtcacagatcct
atgctcgattgggcctttcttggcatggccaccggagaagtcttggcctacgatttggac
agggagaatattgcgagatcattccggctaccaaacttttggaaagagagggatccgaat
gcccgcattgttgggctggtgagcatttcgttgcatccgagagatatcgggcaaatgctc
atcgcgtacaccacgggcatcgttatttattcgtttaagcaaaacaaagctctcaagttc
ttcgaatacgtacttcaaccaggcgcacctggtggtggagggcagccggcggacacagtt
cgtaggccgagagtcacgcatgctctctggcatccaacaggaacctttatcatgacggcg
cacgaagatggcagtttggtattctgggatcctaaggatggccgcatcatcatggcaagg
acactcacggaaatgagtgtcgatcagtcaacaccgaacgccggacatgccggctacaca
gagccatatgggcgtattgcttggtgctgcaaggagaatccggatgatactgggctcttg
atttctggtggtcagaatccggaatctccccaggaggggctgaccttcatcgaattgggc
caaacaccaatttatgcgacttcgagttggcaagttcttcaggaccatctgaaaggcaaa
cgccaaatcaccttgccaactccaccgggcgcccaagtggcagacttcctcctcatccct
cgttcttcgccctattttgctggcgcacaagatcccattgcgatcatgaccctcctgact
tcgggcgagctgctgacgatgagcttcccgtcgggatacccaatcagccccacaaaccaa
ctgcatccgtccgtctcctttgtccacccatatgtcaataaattcgctgtgcaaacgttg
gatagaggtcgctggatgggaatggtcgagaccagaaaccagggcgaacctcttctgaag
ggtggtgccgagacagcgaagcccaagcgcagatacgaaggtcgcacgatcttccagata
gcacatggggacagcaccgtgcgactttgggatgctggtcatgatgatgagatcgagaac
ccaaccatgctgcaagttgatgtcgcacgcgcactggaccgctaccaagacatcgacatc
accacgatgaacatggcccccaacactggcgaattcgcggtcggaacgcgtacgggtgaa
ttggttctctacagatgggccggcaatcggttctttggaaaagaccaccatgaagatctg
ccacccaacccgggagcgctgacggacatcagctcaagagcggagcccggcctcaaggag
ggtttgcagccctggcaactgtacgagatgatgcaaggtcctatcacggccacttgcgtc
tcagacgtgggcttcgtaggcgtcggctctgagggtggcttctttagtgtcatcgacttg
cgtggtccctctgtcatcttccaaatctccatgactgaattcgctcagcaatccaagaga
tcttctttcttgaaagggtctcatgggaacgcccatggaaaggagtggccggtggccatt
gagtttagcgtcatgacgttagaaggcgacaactactctagcatctgttgttttgtggga
acgaacctcggcaaagtagccacgttcaagctgttaccgtctggaaatagctactccgtc
aagctagctggcgtccaacattttgatgggcaggtagtggcactctgccccatccaagca
gactctggaagacctgcttttgcaacaggtccaatcgtagcgggactgagaaacgggcag
caggttaatggtgttctcgttgctgtgacacaaaccgaaattcgaatcttcaagcccgcc
ggcgggaagggcgcttccaagacctttgacgacatcctctgcgatgcagccaacgtcact
gagtttgagcttcacggcttcgccattgtcggtgtttttggtgaccgaacgactcgtgca
ttctccattcctggtctcaaggaaattggcaacgcgccgcttcccatgctcgatggcagt
cgcactctatcgtccgtagtgactcagactggcgacattttcggctggactgggcccagt
gagattgccgttctcaatgtctggggtactggcaaagatcttcagataagcgacgacatt
ctcgtcaaccccgagctcgtcacacccccgcgccctacaatctcgaacatgcagtggctc
tccggcacgcagcatatctccccgacagacctcgacctcctcatcgaccccaatcgcccg
ccaagccggcggatgatggccgccgcggcagctgaagcgagagctgcccgctctgcaggc
cagcccggctcgaacaatgcgggaggatctaacgaaggctggggcgattatctgacgagg
cagcttaacgagcgcacggagaagctgaacatcatgagcgataacatggatagtctgcaa
aatcagagccaaggctgggcggacgacgttggcaaatacatcaacaagcagaagaggaat
gtggtcctgggagggctgaagagcaagttcttttaa
DBGET
integrated database retrieval system
