KEGG   Colletotrichum lupini: CLUP02_06516
Entry
CLUP02_06516      CDS       T08561                                 
Name
(RefSeq) DNA polymerase family B
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
clup  Colletotrichum lupini
Pathway
clup03030  DNA replication
clup03410  Base excision repair
clup03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:clup00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CLUP02_06516
   03410 Base excision repair
    CLUP02_06516
   03420 Nucleotide excision repair
    CLUP02_06516
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:clup03032]
    CLUP02_06516
   03400 DNA repair and recombination proteins [BR:clup03400]
    CLUP02_06516
Enzymes [BR:clup01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CLUP02_06516
DNA replication proteins [BR:clup03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    CLUP02_06516
DNA repair and recombination proteins [BR:clup03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      CLUP02_06516
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf-DPOE DNA_pol_B DNA_pol_B_exo2 zf_DPOE_2 RNase_H_2
Other DBs
NCBI-GeneID: 73340525
NCBI-ProteinID: XP_049142658
UniProt: A0A9Q8SPJ9
LinkDB
Position
3:join(5852660..5853273,5853330..5853472,5853531..5859466)
AA seq 2230 aa
MPNTSLRRPQKGYRRGGKQAYHGPSRTTRTFAASGRNEATSADEKWERTRLAHQIDENMG
FARYEGGKRKEGWLVNVQPTSVEDDRNPNGRAALDCYFIEDDGAHFKATVEYDPYFLIAV
KKGRESEVEEWLKRVPGDGVVKTIKRVDKEDLKMPNHLLGYRRTFLELRFTNVADLMAAR
KDIMPIAAKNRKNVDALDAYAEVSTMNGDFDLFDDSRDDDRRTNASFADASDFIVDIREY
DVPYHVRVMIDMDIRVGKWYFIDVKHGVTKITTNEDRLAMADPVVMAYDIETTKLPLKFP
DAAIDQVMMISYMIDGQGFLITNREIISEDIGDFDYTPKPEYPGPFMIFNEPDEKAVLER
FFLHIKEARPTVIATYNGDFFDWPFVDARASINGIDMYQEIGWKKDSEDQYKCSYSVHMD
CFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYAQERPQTLAEYSVSDAVAT
YYLYMKYVHPFIFSLCTILPLGGDDTLRKGTGTLCEMLLMVQAYQQEIVLPNKHVSPREA
FYEGHLLDSETYVGGHVESIEAGVFRADIPVNFAVDTGAVDELLNDLDAALKFSITVEEK
KSMDDIENYDEIREQIASRLRALKETPNRSERPLIYHLDVASMYPNIMTTNRLQPDSMIQ
ESDCAACDFNRPGKTCDRRMPWAWRGEYLPAKRDEYNMIRNALENEKFPGKWPNSPQRTF
QDLSPDEQTALLRKRLQIFSQKVYHKIHDSTTTVKEAIICQRENPFYINTVRDFRDRRYD
YKGKAKVWKGKTEALKSSGATSSEVDAAKKMIILFDSLQLAHKVILNSFYGYVMRKGSRW
YSMEMAGVTCLTGATIIQLARSLVERLGRPLELDTDGIWCMLPATFPENFAFKTKGGKKV
TISYPCTMLNHLVHAKFTNHQYQTLTDPKTLKYETHSDNSIFFEVDGPYKAMVLPTSKEE
DKNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFLEGETLAECYAAVAK
VANQWLDVLHSKGATLADEELMELISENRSMSKTLEEYGSQKSTSITTAKRLADFLGEQM
VKDKGLNCKFIICARPKNAPVTERAIPVAIFSAEETTKRFYLKKWLKEEPADTDPRALLD
WDYYLERLGSVIQKLITIPAALQKVRNPVPRVAHPDWLQRRINIKDDKMKQKKLTDLFTK
GPLEDITNRNGRSATDMEDFGTQLLKPKPVTSVVAASQPTAQKRKSPEAAESTDPFAALP
MVMPSPSDDYIGFLQYQKQKWKIQKQARIRRRQLFGDRRGNNQNNIQNTFMKQAHMTYMS
NWQLLHLKPTETPGIVNAHVLIDAKIHSLKIKVPRQVFLNLRSGEMPDVDIPGCEVEQVN
HTLPNGHSSVHLFKLTVPEDVYFNEADKFSLLFNHPSVEGVYEKHLPLNIRAVLQLGNLC
TIDEQQHAVLGKGLEQGFDLSGLKRPLKAKTYLETSPLAYIYVSHVTAGDKQIFGVFSTL
KDEAHVIILQKGRDSGQDLPNISRIYTELLARRGEEAEGTNWQDCFTYQEKLNFKITQVT
TRRKAHLELSDVVKKMRKDELRPLMMVIQSSQRNMLINDVPILGEFPVLPLKYDAADSSL
PPLGWQAVVARRLVGHYLGLGSWILHLTTLARYGEVPLCNLEREDPRFLIDIAYARRLQN
NNVVLWWSASPRPDHAGHEKDDIIGPLETVQMPSINNPGTFSSVCIDLEVRNLAINTILT
SSLINELEGSESISFNPAGDGNAAGDEVISSEGTFANAGVLVLREMVKSWWQEACKGNTM
ADVMVQHLVRWVENPDSFLYDRALHYYVQMMSKKAFQQLMADFRRVGSQVIFANSNRLLL
QTTKAEVGTAYAYSQYIIKSIKSKPLFHFIDLEIKEYWDYLVWYDEFNYGGKACQEVVEA
EQQTLDTVMHWQMATFLPIRLQPTFQDWVIEFIQLMHNLKRPQDGDFSSTPRLTQLPQKA
LAEGAQGQIILGKVFEKPLKKDIANLVNLQKRELLHPELAEDYSFPKLPGSHLAHLSSRN
AVLELVKSLMQVLSLDKNITLEARLLRKELLAMFDVREFSKEGAFQNPSESLKVIQLSCD
SCTMARDLDFCRDEDLLPEIGPDGRRLGPETRPWRCTFCEAEYDRNAIEETLLASVEAFV
VEWTTQDLKCGKCGALRMNEFMEHCTCSGTWVESVKRADIVRRLSVYWSVAKFYGLRMLL
EVTEGLRKGL
NT seq 6693 nt   +upstreamnt  +downstreamnt
atgcccaacacgagcctacggcgcccgcaaaagggctaccgccgcggcggcaagcaagcc
taccacggcccctcacgaacgacacgcaccttcgccgcctcgggccgcaacgaggccacc
tcggccgacgagaagtgggagcgcacccggctggcgcaccaaatcgacgagaatatgggt
ttcgcccgctacgagggcggcaagcgcaaggagggctggctcgtcaacgtgcagcccacc
tcggtcgaggacgacaggaaccccaacgggcgggcggcgctcgactgttactttatcgag
gacgacggcgcgcacttcaaggcgacggtcgagtacgacccctactttttgattgccgtg
aagaagggccgcgagagcgaggtcgaggagtggctgaagcgcgtgcctggcgacggcgtc
gtcaagacgattaagagggtggacaaggaggatttgaagatgccgaatcatctgctaggg
taccgccgcacgtttctggagctgaggtttacgaatgtggcggatttgatggcggcgagg
aaggatatcatgcccattgcggcgaagaacaggaagaatgtggatgctttggacgcatat
gccgaggtttcaacgatgaatggcgactttgacctttttgacgattcacgagatgacgat
agacgaacgaatgcttcttttgccgacgccagcgacttcattgtcgatattagagagtac
gacgtgccgtaccatgtaagagtaatgatagatatggatattcgggtgggaaaatggtac
ttcatcgacgttaagcacggcgtcacaaaaatcacaaccaatgaggaccgcctggccatg
gcagacccggtagtcatggcctacgatatcgagacgacgaaactgcccctcaaattcccc
gacgccgccatcgaccaggtcatgatgatttcgtacatgattgacgggcagggtttcctg
atcacgaacagggaaatcatctccgaggacattggcgactttgactacacccccaagccg
gaatacccaggaccctttatgattttcaacgaaccggacgagaaggccgtgctggagagg
ttcttcctacacatcaaggaggcgagaccgacagtcattgcgacgtacaacggtgacttt
ttcgattggccctttgtggacgcccgagctagcatcaacggcatcgacatgtaccaggag
attggttggaagaaggacagcgaggaccagtacaagtgcagctacagcgtgcacatggat
tgtttccactgggtgaatcgtgactcctacctgcctcagggatcccgaggtctgaaagcc
gtcaccgtcgccaagctcggttacgaccccgacgagctcgaccccgaactcatgacgcca
tatgcccaggaacgcccccagaccctggccgagtactcagtttccgatgctgtggcgacg
tactacctgtacatgaaatacgtccatcccttcattttctctctatgcacgattctgccg
cttggtggtgacgacacgttgcgaaagggtaccggtaccctttgcgagatgttgttgatg
gtgcaggcctaccaacaagagattgtgttaccaaacaagcatgtgtcgccaagagaagcg
ttctacgaaggacacttgcttgactcagagacgtatgtcggtggccacgtcgaaagtatt
gaagcaggtgtcttccgcgcggatattcccgtaaattttgcggttgacacgggtgcagtt
gatgagctgttgaatgatttggacgccgcgctgaaattcagtattacggtggaggaaaag
aagtccatggacgatattgaaaactatgacgagatcagggagcaaatcgcttctcggttg
cgcgcattgaaggagacaccgaaccgcagcgagcgacccctaatctaccatctcgacgtt
gcgtccatgtaccccaatatcatgacgacgaaccgtctgcaaccggactccatgatccaa
gagtcggactgtgcggcatgcgacttcaaccgcccaggcaagacgtgcgatagacgcatg
ccgtgggcgtggagaggagagtacttgccggcaaagcgggacgagtacaacatgatcaga
aatgctctggagaatgaaaagttccccggcaagtggccgaattcgcctcagaggacgttt
caggatttgtctcccgacgagcagactgctctcctgcggaagcggttgcagatcttttcg
caaaaggtttaccacaagatccacgactcgacaacgactgtcaaggaggccatcatctgc
cagcgagagaatccgttctacatcaacaccgtacgagacttccgtgatcgtcgatacgat
tacaagggtaaagccaaggtctggaagggcaaaacggaagccctgaagtcctctggcgca
acctccagcgaagttgatgcggctaagaagatgattattctcttcgactcgctgcagctt
gctcacaaggttattttgaattccttctatggctatgtcatgagaaagggatccagatgg
tattccatggaaatggctggtgttacgtgtctgacgggagcgacaattattcagctggcc
aggtcgctcgttgagcgattgggtcgtcccttagaattggatacggacggtatctggtgt
atgcttcccgccacgttcccggaaaacttcgccttcaagaccaagggaggcaagaaggtc
accatctcgtacccctgtaccatgttgaaccatttggttcacgcaaagttcaccaaccac
cagtaccagacgctcacagaccccaagactctcaagtacgagacgcacagcgacaactcc
atcttcttcgaagtcgacggcccttacaaggccatggtcttgccgacttccaaggaggag
gacaagaatttgaagaagcgttatgcagtcttcaacgacgacggcagtttggccgagttg
aagggtttcgaagtgaagcgcagaggtgagctgaagctcatcaagatcttccagcagcaa
atcttcaagttttttcttgaaggagaaactcttgccgagtgctatgctgccgttgccaag
gttgccaaccaatggcttgatgtattgcacagcaagggtgcaacgctagcggacgaggaa
ctcatggagcttatttcggagaacagaagcatgtccaagaccttggaggagtacggttcg
caaaagtcaacttcaatcaccacggcgaagcgtttggcagacttcttgggtgaacagatg
gtcaaggacaagggattgaattgcaagttcattatctgcgccagacccaagaacgcgccc
gtcaccgagcgagccatcccggttgccatcttctctgctgaagagacgacgaagcgtttc
tacctcaagaaatggctcaaggaggaacctgcggacaccgacccgagagctctattggac
tgggactactacctcgagcgcctgggatccgttatccagaagctcatcaccatccctgct
gcgctccagaaagtcaggaacccggttcctcgtgtggctcaccccgactggctgcaacgc
cggatcaacatcaaggacgataagatgaagcagaagaagctcaccgaccttttcaccaag
gggccactggaagacatcaccaaccgcaacggtcggtccgcaaccgacatggaggacttc
ggcacacagctactcaagccaaagcccgtgacgtctgtggtggccgcttcacagcctact
gcccagaagagaaagtctcccgaagctgctgagagcactgatcccttcgccgcactgccc
atggttatgccctccccctcagacgactacattggcttcttgcaataccagaagcaaaag
tggaagattcaaaagcaggctcgcattcgaagacgacagctttttggagaccgacgcggc
aacaaccagaataacatccaaaacacgttcatgaagcaagcccatatgacttacatgagc
aattggcagctgttgcatctcaagccgacggaaactcctggtatcgtcaacgctcacgtt
cttattgatgcaaagatccactcgctcaagatcaaggtcccgcgacaggtgttcttgaac
ttgagaagtggcgaaatgcccgacgttgatatccctggctgtgaggtcgagcaggtcaac
cacacgcttccgaatggtcactcttccgttcacctcttcaagcttacggttcctgaggac
gtctacttcaatgaggcggacaagttctcgctgctgttcaaccaccccagtgtcgaaggc
gtgtacgagaagcatttgccgctgaatattcgggctgtgcttcaactgggtaatctctgc
accattgacgaacagcaacatgcagtcctcggaaagggcctggagcaaggcttcgatcta
agtggtctcaagcgtcccctgaaggcgaagacctatcttgaaacttcacccctggcatac
atctacgtttctcacgtcactgctggcgacaaacaaatctttggagtcttttctacactg
aaggacgaggcacatgtgatcattctgcagaagggcagagactcgggccaggacctcccc
aacatctcccgaatctacaccgagctacttgctcggcgaggagaagaggcggaaggcacg
aattggcaggattgctttacctaccaggagaagctcaacttcaaaatcacccaggtcacg
acaaggcgaaaggcgcatttggaactcagcgacgtcgtcaagaagatgagaaaggacgag
ctgcgaccactcatgatggttatccaatcatcccagcgcaacatgctcatcaatgacgtt
ccgattctcggcgagtttccagtactgccgcttaagtatgatgctgcggatagctccctg
ccgccacttggctggcaagcagtcgttgctagacggcttgttgggcattatcttggtctt
ggctcctggatcttgcatcttacaacactcgcacggtacggagaggttcctctctgtaat
ctcgagcgagaggacccgcgcttcctcatcgatattgcctatgctagaaggttgcagaac
aacaatgttgtcctgtggtggtccgcaagccctcgtcccgaccatgccggtcacgagaaa
gatgacattatcggcccgctcgaaactgtccagatgccctcgatcaacaaccccggcacc
ttctcctcggtctgcatcgacttggaggtcagaaacctagccatcaacaccatactcaca
tcctctcttatcaatgagctggaaggctccgagtctatttctttcaatcccgccggagat
ggtaacgcggctggcgacgaagtcatctcgtcagaaggcacgtttgccaacgctggtgtg
ttggttctccgagagatggtgaagagttggtggcaggaggcctgcaagggcaacaccatg
gccgatgtcatggttcagcacctggtccgttgggtcgagaatcccgattccttcctgtat
gaccgtgctctgcactattacgtgcagatgatgtccaagaaggccttccaacagctcatg
gccgacttccgccgagtcggctctcaggtcatctttgccaactcgaaccgccttttgctt
cagacgaccaaggccgaggtcggtaccgcgtatgcctacagtcagtacattatcaagtcg
atcaagagcaagcccctcttccacttcatcgatcttgagatcaaggaatattgggattac
ctagtatggtacgatgagttcaactacggcggcaaagcctgtcaggaggtggtggaggca
gagcagcagactctcgacaccgtcatgcactggcaaatggcgacattcctccctatccgc
ctgcagcccactttccaggactgggtcattgagttcatccaactcatgcacaacctcaag
cgccctcaagacggagacttctcctcgacgccgcgccttacacaactcccgcaaaaggcc
cttgcggagggcgcccagggacaaattatcctaggcaaagtctttgagaagcccctgaag
aaggacattgccaacctcgtcaacctacagaagcgcgagctgctccacccggagctcgcg
gaagactactccttccccaagctccccggctcgcacctcgcccacctctcctcgcgcaac
gccgtcctcgagctcgtaaagtccctgatgcaggtcctctccctcgacaagaacatcacc
ctcgaagcgcgcctcctgcgcaaagagctgctcgccatgttcgacgtgcgcgagttcagc
aaagaaggcgccttccagaacccgagcgagagcctgaaggtgatccagctcagctgcgac
agctgcaccatggcgcgcgacctcgacttctgccgcgacgaggacctgttgccggagatt
gggcccgacgggcggcggctgggaccggagacgaggccttggcggtgtacgttttgcgag
gccgagtatgatcggaatgcgatcgaggagacgttgttggcgagcgtggaggcgtttgtg
gtggagtggactacgcaagatctcaaatgcggcaagtgtggtgcgttgaggatgaacgag
tttatggagcattgtacgtgcagcgggacgtgggttgagagtgtcaagagggcggatatt
gtgagaaggctgagtgtgtattggagcgtggccaagttctatgggttgaggatgttgttg
gaggttacggaggggttgaggaagggtctttga

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