Colletotrichum lupini: CLUP02_06538
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Entry
CLUP02_06538 CDS
T08561
Name
(RefSeq) RINT-1 family protein
KO
K20474
RAD50-interacting protein 1
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clup04131
]
CLUP02_06538
Membrane trafficking [BR:
clup04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
CLUP02_06538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
Zwint
COG4_C
Relaxase_C
ATG14
CRISPR_Cse2
Motif
Other DBs
NCBI-GeneID:
73340547
NCBI-ProteinID:
XP_049142680
UniProt:
A0A9Q8WFM8
LinkDB
All DBs
Position
3:join(5919438..5921337,5921392..5921441,5921492..5921911)
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AA seq
789 aa
AA seq
DB search
MSTTFGDRAQAGALDIRVEDFLDDKLQSTTDLENLDSLIANVEVQRSQLQTQLDNAIKQL
DEARQTAGDRQSSLAQRIQDFQELQHSIDVRVKIAAASDAPNQAIARLQQPMKKLQTIEL
AQKYLTLLQDVENLRTEARSHLPDSPKAALEPYSKLKQLSRRLEELSGPADDAAVHLVNH
VRSVADALWDEMKKTMSSELETVLSKRSWPMVEPSSEMDDEWLACFEKLLDLQIPEVILS
KSTVSLLSFDVMSRIFISEFRFHFLSDKPTSKPDAIGSHCFPWFLATIEKWEDFYRDNLG
YLLAAKFRDTSAGNSLVYVDPVCAFITSMLPVMREKVQNVVAETAKNPAFLSSFMGQLMT
FDESIRTKFNYDGGDPDQGWPGLATEVLEQWFEPWFQAEKEFALERFQAIMDSSDARIID
YDYAITGKTKPTFGAVRVTDLLRSITTQYERVRAFKHKIRFLIGIQLDILDEFHDRLRGS
LEAYQALTSTVGRTLHGVTKEQLAALEGTGSFESLCKVYGSADHIVNTLKDWGNEEFFVT
LWDQLQGRATKEGETSRMSGEMSYEEVKDRTSAAVGSEANDGVLFDETIAAYSLRRKTAQ
EFLVSALADSHHKAFRAYATRTHWTTISDSGSEIDPSQLAVTPELDEPLRILKRNFDFLL
KAIGTAAFRRTWRSALDKLQDLLWGEVLMRQSFTAFGAAQFTRDVNAISSLVERYIQNGV
GSLGSLFDALKLLNLPNEPQEGTLSLKDATDRVFTDNTEAKKLLEELDIDTLTPANARHI
LQRRVENKE
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgacgtttggagaccgcgctcaggcgggcgctctggatatccgcgtcgaagat
ttcctcgacgacaagcttcagtccaccactgatctcgagaacctcgactccctcatcgcc
aacgtggaggtccagcgcagccagctccagacccagctcgacaacgccatcaaacagctc
gacgaagctcgccagacagccggcgatcgccaatcctccctcgcgcagcgtatccaagac
ttccaggagctccagcacagcatcgatgtccgagtcaagatagcggccgcatccgacgcc
ccgaaccaggccatcgcaaggctgcaacaacctatgaagaagctgcagacaatcgaactt
gcccagaaatacctgacgctgctacaagacgtcgaaaacctgcggaccgaagctcgctcg
cacctccccgacagcccaaaggccgctttggagccgtactcgaagctcaagcaattgtcg
aggcgcctggaggaactctcagggccggctgatgatgcggcagtacatctcgtcaatcac
gtgcggagtgttgccgatgcgctgtgggacgagatgaagaagacaatgtccagcgagctg
gagactgttctcagcaagaggtcatggcccatggtggaacctagctctgaaatggacgac
gagtggctcgcctgctttgaaaagttgctggaccttcagattcccgaggtcatcctgagc
aagtccaccgtcagccttctctcgttcgatgtcatgtcacgaatcttcatctctgagttc
cgcttccactttctcagcgacaagccgacgagcaaacccgatgccattggatcgcactgc
ttcccctggttcttggcaaccattgaaaaatgggaagacttctatagagacaacttgggt
tacctgctggctgccaagttccgcgatacctccgcgggtaacagtctagtatacgttgat
ccggtctgtgctttcatcaccagcatgctgcccgtcatgagagagaaggtccagaatgtg
gttgccgaaacggccaagaaccctgccttcttgagcagcttcatggggcagttgatgaca
ttcgacgagagtattcggacaaagttcaactatgacggcggggatccagaccaaggttgg
cccggcctggctactgaggtcttggagcagtggttcgagccttggttccaggcagaaaag
gagtttgctctcgagcgctttcaagctatcatggatagctccgatgcacgaattatcgac
tacgattacgctataacgggaaagacaaagccgactttcggcgcagtgcgcgtcactgac
ttgttgaggtctattacaacccaatatgagagagtacgcgccttcaagcacaagattcgg
ttcttgattggaattcaactcgatattctcgacgagttccatgaccgtctgcgtggctct
ctcgaggcctatcaagctctcacatcgacagtcggcaggactttgcacggtgtcacgaaa
gaacagcttgcggctctcgaaggcaccggtagtttcgagtctctgtgcaaggtttacggc
agtgcagaccacattgtcaacacgctcaaggactggggtaacgaggaattctttgtcacg
ttatgggatcaattgcagggtcgcgcgaccaaggaaggcgagacgtcgaggatgtctggc
gagatgagttacgaagaggtcaaggatcgcacctctgctgccgtcggctccgaggctaat
gacggcgtcctctttgatgagacaatcgctgcgtacagccttagacgcaagacggcgcag
gagtttttggtgagcgcgcttgcagactctcatcacaaagcctttagagcatatgcgaca
cggacacactggacaaccattagtgacagtggttccgagatcgatccgtcgcaattggct
gttacaccagagctcgacgagcccttgagaatcctcaagcgcaactttgatttcctactc
aaggctattggcacggcagcgttccgacgcacatggcgctccgcactggacaaactccaa
gacctgctttggggcgaggtcttgatgaggcagagcttcaccgcgtttggtgcggcccag
ttcacgcgtgacgtcaatgccatctcctcccttgtggagagatatatccagaatggtgta
ggatcattgggtagtctgtttgacgcgctgaaattgctcaacctcccgaacgaaccccag
gagggcactttgtcgctcaaggacgctacggatcgggtgtttaccgataacacggaggcc
aagaagttgttggaagagctggacattgacacgctcacgcccgcgaatgctaggcatatt
ttgcagcgcagggtggaaaacaaggaatag
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