Colletotrichum lupini: CLUP02_07570
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Entry
CLUP02_07570 CDS
T08561
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clup03032
]
CLUP02_07570
03029 Mitochondrial biogenesis [BR:
clup03029
]
CLUP02_07570
Enzymes [BR:
clup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CLUP02_07570
DNA replication proteins [BR:
clup03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
CLUP02_07570
Mitochondrial biogenesis [BR:
clup03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
CLUP02_07570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
Pif1_2B_dom
Herpes_Helicase
Viral_helicase1
AAA_5
AAA_22
AAA_16
Cauli_VI
DEAD
AAA_14
AAA_29
Mg_chelatase
ABC_tran
RNA_helicase
AAA
Helicase_RecD
NPHP3_N
Rad17
ATPase_2
nSTAND3
DUF815
UvrD_C_2
RsgA_GTPase
AAA_7
APS_kinase
SLFN-g3_helicase
NB-ARC
Motif
Other DBs
NCBI-GeneID:
73341574
NCBI-ProteinID:
XP_049143707
UniProt:
A0A9Q8SR93
LinkDB
All DBs
Position
4:join(1483591..1483831,1483906..1483934,1483984..1484609,1484666..1485289,1485354..1485672,1485768..1485963,1486046..1486449)
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AA seq
812 aa
AA seq
DB search
MAKPARNQLVGNPRPASEQALQAARNYINDSRNPVVLKRGHAPKYYVVYYLRGPGAHGRK
YGIFTDWNDTKKQTEGCENKNTTASSFNVAIDLLISGLALEIDAGSLMNYSPAHQSRSTV
PAPAPAAAPSAVKRPREEQGEHDQEPSDVFYPDVHRSKAVKREANHQCGSRESPIKIEDD
DDVVIKDEKDDAREAVIKKEQDDPAQAAIKREGDGFHEAAIKRERGFDEEEEVMRESEGF
FPLKGYSDQTNEYIKRENDRPKGENDPAVVKAAPEFPLCPEQQHALDLAMQGHSLFITGS
GGCGKSVLVKALNKALSAQEKIVYLVAPTGQAATNIDGRTTFSYAGWNVSAPEETFKTLV
QKSRYPSVFNRIESTDVLIIDEISMVEGEFLNRLSDVLGMLRRERFATGRGIICRKQTAD
SVRRPFGGIQVIAVGDFCQLSPVQPFEHCTEEVAYDPHRQTSTACGKLVFDKERNLHFCP
RDREHPTFPDAQKWAFNSRTWADCNFQYIHLTKVHRQSDEKFISMLQKIRLGHTTDADLN
VLLQPREVRNGIALFGRRQKAKDYNKGELDKLPSRPEQFDALDHPKKLGEDRKNRFDKQL
ILKAGMPVVLLANLDVENGFCNGSQGKLVRFIRKLDECNKPKMPEKGNYKGDTYGFQIAC
ARYEQMTNYINGPSGAKGFPVIIFANGQNRVILPYCDMDDIETEVIPTENGYKKVLKSYS
ARTQIPLVPGWAMTIHKSQSLSLDRVSVHLQNVWCGRQTYVALSRARSLSGLKVIGNKLT
MRSTLPLDPEVSRFMMEAERRAAAAPADQAND
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggccaagccggcccggaatcagctggtcgggaacccccgacctgcgtccgagcaggcg
ttgcaggccgcgagaaactacatcaacgactcgcgcaatccggtcgtgctcaagagagga
catgccccgaaatactacgtggtctactacctgcgcggacccggggcgcacggtaggaaa
tatggcatcttcacggattggaatgataccaagaaacagactgaaggatgcgagaacaaa
aacactaccgcttcgagcttcaacgtggctatagaccttctcatctctgggcttgctctc
gagatcgacgctggctctttgatgaactattccccggcacatcaaagtaggtctaccgta
cccgcgcctgcacccgccgcggcgccttctgcagtcaagcggccccgggaggagcaggga
gagcacgatcaggagccttcggatgttttttatcctgacgtccatcgatccaaagccgtc
aaacgcgaagcaaaccatcaatgtggttcacgcgagtcgcctatcaagattgaggatgat
gacgatgtggtcatcaaagacgagaaggatgatgctcgcgaggccgtgatcaaaaaggag
caggatgatcccgctcaggcagcaataaaaagggagggggatggtttccatgaggccgcg
atcaaacgggagaggggttttgacgaagaggaagaagtaatgagggaatcggaggggttt
ttccctctcaagggctactcagatcaaacgaacgagtatatcaaacgcgagaatgatcgc
cctaaaggcgagaacgacccggcagtcgtaaaggcggccccggaatttcccctatgccct
gaacagcagcacgccctagatctggccatgcaaggtcacagcctcttcatcacgggatct
ggcggctgcggcaaatcggtcctggtgaaggccctcaacaaggccctaagcgcccaagaa
aagatcgtctacctcgtcgcgcctacgggccaggccgccactaacatcgatggcaggaca
acgttttcctacgctggatggaacgtcagtgccccggaggagacattcaaaactcttgtc
caaaaatcgcgttacccttcggtgtttaaccgcatcgagagcaccgacgtcctcatcatc
gacgagatcagcatggtcgagggcgaattcttgaaccggctctctgacgttcttggaatg
ctccgacgggagaggttcgccacaggcaggggcattatctgcagaaaacagaccgcggat
tcggtgaggcgacccttcggcggcatccaggtcatcgcggtcggggacttctgccagcta
tcccccgtgcaaccgttcgagcactgcactgaggaggtggcatacgacccgcaccgccaa
acttcgacggcgtgtggaaagttggttttcgacaaggaacgcaatctgcacttttgtcct
cgagacagagagcaccctacatttccagatgctcaaaaatgggccttcaactcgcggacc
tgggcagattgtaattttcaatacatccatctaaccaaggtccatcggcaaagcgatgag
aaattcatatcgatgctccagaaaatccgcctgggtcacacaaccgacgccgatctcaac
gtcctgctgcaacctcgcgaagtcaggaatggtatagccctgttcggccgcaggcagaaa
gccaaggactacaacaagggggagctcgacaagcttcccagccgcccagaacagtttgat
gccctggaccacccgaaaaaactcggcgaagaccgaaagaaccgattcgataagcagctg
atactcaaggctggcatgccggttgtgctgctggctaacctcgacgtcgagaatggtttc
tgcaacggcagccagggcaagctcgtccgcttcatacggaagttggacgaatgcaacaag
cccaagatgcctgaaaaggggaactacaaaggggacacctacggctttcagatcgcatgc
gcgagatacgaacagatgaccaactacattaatggtccctcgggtgccaagggtttccct
gtaatcatattcgcaaacggccaaaatcgcgtcatcctcccctactgcgacatggacgac
atcgaaacagaggtcattcccaccgaaaacgggtacaaaaaagtcctgaagtcatactcg
gcgcgcacacagatccctctagtcccgggctgggccatgaccattcacaagagccaaagc
ctgtcgctcgaccgtgtcagcgttcacctccagaacgtctggtgtggaaggcagacctat
gtggccctgagccgcgcgcgatctctcagcggtctcaaggtcatcggaaacaagttaacg
atgaggagtacactgccgctggaccccgaggtgagcagattcatgatggaggcggagcgc
cgggcggcagcggccccggcagaccaggcgaatgattag
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