Colletotrichum lupini: CLUP02_07865
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Entry
CLUP02_07865 CDS
T08561
Name
(RefSeq) TruB family pseudouridylate synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clup03016
]
CLUP02_07865
Enzymes [BR:
clup01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CLUP02_07865
Transfer RNA biogenesis [BR:
clup03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CLUP02_07865
Prokaryotic type
CLUP02_07865
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
73341867
NCBI-ProteinID:
XP_049144000
UniProt:
A0A9Q8SRT4
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Position
4:complement(join(2468926..2470433,2470531..2470711))
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AA seq
562 aa
AA seq
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MQRSARSTESAKAKEKVAPTPTGRIVSFSLLPLKILNFGRMRITPNLWKMAKDTVYEGVF
AINKPYGMSSAQVIRDCQQQMNPSAMFKPLIERDLAAKMQESKQEWKRRRAVKKDSRVKM
GHGGTLDPLATGVLILGVGSGTKSLGSFLDCTKTYETVVLFGASTDTYDRVGRILSRRPY
DEITKEKVEKAMDSFRGKFEQIPPLYSALKMEGKPLYEYAREGKAIPREIVGRDVEVSEL
ELVEWYEPGTHNYRWPTEEAETAEKNLAEQVWRVEKQQGSGRRLTPEEEKEEEKALSEHE
TVKKKFEERQDGLIRDKPAKKQKPPKNPALMSGALGQLPGGKGSNLIPPPPSADEPFPWT
DKGPPAARIRMKVTSGFYVRSFCHDLGAKVDSAGMMAELERSRQGDFEVRTDSCLEYDDV
LKGEEVWGPKVAKALSEWTEKYPNGAPQSQRERQNAQGQQKQQQNHGRKDDRKRKWENKS
FEKNDNASKKRRNSSSGDEAPAAKVVKSEQASDVKESSPKKSPKASPKASPKASPKGSPK
TSPKAKSANKKKFDDVWEGIQD
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcagagaagcgcaagatccacggaaagcgcaaaagctaaagagaaggtcgcacctacc
cccaccggccgcatcgtttctttctctcttttacccctcaagatccttaacttcgggcga
atgagaattacgcccaatctctggaagatggcgaaagacaccgtgtacgaaggcgtcttc
gccatcaacaagccatacggcatgagctctgcgcaggtgatccgcgattgccagcagcag
atgaacccctcagccatgttcaagccgttgatcgagagagaccttgccgccaagatgcag
gagtccaagcaagagtggaagcgccgccgagccgttaagaaagactcccgcgtaaagatg
ggccacggaggcacactcgacccattggcgaccggcgtgctcattctgggtgtcggatcg
ggtaccaagtcactcggctccttcctcgactgcaccaagacctacgagacggtggtacta
ttcggcgcaagcacagacacctacgaccgcgtcggtagaatattgagcagacggccgtac
gatgagatcacaaaagaaaaggtcgagaaggcgatggacagcttcaggggcaagttcgag
cagatcccgcctctgtactcggcactcaagatggagggaaagccgctgtacgagtacgct
cgtgagggcaaggctatccctagagaaatcgtgggacgcgatgtcgaagtgtccgagctc
gaattggtcgagtggtacgagcctgggacgcacaattacagatggcctaccgaagaggct
gagacggccgagaagaacctcgctgagcaggtctggcgagtggagaagcaacagggctcc
ggccgccggctcactcccgaggaggagaaggaagaagagaaagccctctctgagcacgag
actgttaagaagaagtttgaggagcgccaggacggtcttattcgcgacaagcctgccaag
aagcagaagccgcccaagaacccggccctgatgtctggcgctttggggcagctccccggc
ggcaagggctccaacctcatcccgccacctccatctgcggatgagcccttcccttggacc
gacaagggcccgcccgctgctagaatccgcatgaaggtcacgtctggattctatgttcgc
agcttctgccatgatctgggtgccaaggtcgactctgcgggcatgatggccgagcttgag
cgatcccgacagggcgacttcgaggttcgcactgatagctgcttagagtacgatgacgtt
ctcaagggagaggaggtctggggacccaaggtcgccaaggcattgtctgaatggaccgag
aagtaccccaacggagcaccgcagtcgcaacgcgagcgacagaatgcccaaggtcagcag
aagcagcagcagaaccacggccgcaaggatgacaggaagcgcaagtgggagaacaagagc
ttcgagaagaacgacaacgcgtccaagaagaggagaaactccagctcgggagacgaggcg
cccgccgccaaggtggtcaagtcggagcaggctagcgatgtcaaggagtcttcgcccaag
aagtctcccaaggcatcacctaaggcgtcacccaaggcgtcacccaaaggttctcccaaa
acttctcccaaggcgaagtcagctaacaaaaagaagtttgatgacgtatgggaaggtatt
caagactaa
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