Colletotrichum lupini: CLUP02_07883
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Entry
CLUP02_07883 CDS
T08561
Name
(RefSeq) helicase associated domain-containing protein
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clup03009
]
CLUP02_07883
Enzymes [BR:
clup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CLUP02_07883
Ribosome biogenesis [BR:
clup03009
]
Eukaryotic type
90S particles
Helicases
CLUP02_07883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
adh_short_C2
adh_short
HA2_C
Helicase_C
DEAD
HA2_N
OB_NTP_bind
AAA_22
AAA_19
KR
nSTAND3
PhoH
ResIII
ATPase
AAA_30
Motif
Other DBs
NCBI-GeneID:
73341885
NCBI-ProteinID:
XP_049144018
UniProt:
A0A9Q8SS26
LinkDB
All DBs
Position
4:complement(join(2519670..2519844,2519908..2519917,2520031..2520063,2520132..2520350,2520421..2520714,2520777..2520964,2521546..2521708,2521934..2524847,2525118..2525552))
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AA seq
1476 aa
AA seq
DB search
MGKFVPRQRKHKVLARERAKENGIIPQDSNADEILPEDQKRLQEKRAQLKAELQGDGAKA
SGKKAKRLEKYITNKLRKDENREILAKLAQQKVDTSLFTSTKTLGQGKESKRQALTRALR
EKNAGLAVDADAEELLYEEREEAPERGGVTSKFSIAEPEKAKDAEDEWNGLSDDAENSSS
DEDDDSAEESEESSEGSEESEEDDEDEDESEDDEEESTSTRQSAFKAWALAQRNEALGFE
GTTEASTALEIPRPENFEPRPLEQEPLPQELQPTTNLARKAYAVAVTRTPDIQEVRMKLP
VVTEEQKIMEMIHNNDIVVVCGSTGSGKTTQVPQFLYEAGYGSPGSATPGMIGVTQPRRV
AAVSMSKRVAQELGDHSDRVGYQIRFEGTASAKTAIKFMTDGVLLREMGQDFSLKKYSAI
IIDEAHERSVNTDILIGMLSRINNIRKGDDKVDPSIKPLKIIIMSATLRVEDMTNNTTLF
PTPPPVVEVEGRQHPVTIHFARRTQSDFVEEAFNKIMRGHRKLPPGGFLVFLTGQNEIRY
LSKRLREAFGGFTEASAPKVQISATDAPMEVEDIDFGEVDDVIGADIDDGLDEDEDMEHE
DDKEFEIEGEEGETGPMNMQVLPLYSLLPTKEQMRVFEDPPENHRQVILATNVAETSLTI
PGIRYVFDCGRSKERQYDRFSGVQTYEIGWISKASASQRAGRAGRTGPGHCYRLYSSAVY
ERDLPEFTDPEILRMPVDGVVLQLKAMNLSNVVNFPFPTPPNRMGLRQAEKLLTYLSAIA
PEGQITKIGSTMSIFPLSPRFARILLVGHQHDCLPYTIMMVAALSAAEVFVPEHQAIPSL
EARDESEFRRTADIIAEDRQANIRRLFNAAHKNFCYLDDRSDAIKLLQVVGEYAHDPTEK
WCEDHFVRYKVLKEVTQLRQQITELLRANIPAFKNLKYQDRLDAPSDKQVAYLKQMVAAG
FIDHVALRADKAPVPPEVTRKPGRAIDVPYIPLSPLGVGHGAEKYIYIHPTSPLAHLSPA
ECPEFVVYSQLQRATQGADVNKTPKTRMLALTDVTGGQLASLAKGTPLVSYGKPVKEISS
TANTREVWVVPYLRAEGVGGQGWPLPMKKVVQRRVAVLRQSYRQSRFYISESGETVPLDG
NSSSPECQTSQNKSQNRPVIQTRGELGRLNRTVVTYRESPFPLADLAPMILQQQRSTWKE
NEALIDECMSALREIEMKMTLFSGVAVVTGAASEMGEREDEMECKPGTDRVISGIGRQVA
ISFAREGCKRIALLDRDEDGALETARMCREANGETRTFVMEIDNRNDEDIASCMENVVEE
WGRIDYAVNCAGMFGPKAPSHLLTPAEFDEITNINYRGTWLCSRAELTHMIKQESMKTHD
GRPGNRGVIVNVASNLSLVSRPETPAYNASKAAILRIIDTPMTSEVSSDDPMIAVAPMKR
KGTPQEVADAVLFLCSSKASFIHGASLSVDGGYVIN
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaattcgtcccaaggcaacgaaagcacaaggtgctcgcccgcgagagggccaag
gagaacggcatcatcccccaggactcgaatgcggatgagattctccccgaagaccagaag
cgtctccaggaaaagagagcgcagctcaaggccgaattgcaaggagacggtgccaaggcc
agcggcaagaaggcgaagcggttggaaaagtacatcaccaataagcttcgcaaagatgag
aatcgcgaaatcctcgccaagctcgcgcagcaaaaggtcgacacgagcttgttcacgagc
accaagactctcggccagggcaaggagtccaaacgccaggctttgacgagggcgttgcgg
gagaagaacgccgggttggcagtcgacgcggatgccgaggagctgctttatgaggagaga
gaggaggcccccgagagaggcggcgtgacctccaaattctccatcgctgaaccggagaaa
gcgaaggatgcagaggacgaatggaatggtttgagcgatgacgcagagaacagttcaagc
gatgaggatgacgattcagccgaggagtctgaagaatcaagcgaaggatccgaagagtct
gaggaagacgacgaagatgaagacgaaagcgaggacgatgaagaagagtctaccagcaca
aggcagtctgccttcaaggcttgggctcttgcgcaaagaaacgaagcccttggttttgaa
ggaacaacagaggcctccacagcactggaaattcctaggccagagaattttgagccacgc
ccgcttgagcaggaaccactacctcaggaactacagccgacaacaaaccttgcacgcaag
gcatacgcagttgctgtgacgagaacgccagatatccaggaagtccgcatgaaacttccg
gtggtcactgaggaacagaagattatggagatgattcacaataacgacattgtcgtcgta
tgcggttctacaggttccggtaagacaactcaggtgccgcaattcttgtacgaggccggg
tacggttctcctggctctgctactccgggcatgattggcgtcacgcaaccccgacgagtt
gctgccgtgagcatgtcaaaacgtgttgcgcaagaactaggcgaccactcggacagagtg
ggataccagatccgattcgagggtacagcttcggccaagacggccatcaagtttatgacg
gatggtgtgttgctgcgagagatggggcaagacttctctctgaagaaatactcggcaatc
attatcgacgaagctcacgaaagaagtgtcaacacagatatcctcattggaatgctgagt
cgtatcaataatattcgcaagggcgacgacaaggtggatccttcgatcaagccactcaag
atcatcatcatgtccgcgacgctaagagtcgaagacatgaccaacaataccacactattc
cccaccccgcctcctgtggttgaagtcgaaggacggcagcatcccgtcacaattcacttt
gcaaggcggacacagtccgacttcgtcgaggaggcctttaacaagattatgcgtggtcac
cggaagctaccgccaggaggctttttggtgttccttaccggccaaaacgagattaggtat
ctgagcaagcgcctgagggaagcatttggtggcttcacagaagccagcgcacccaaggtc
cagatctcggccaccgatgcgcccatggaagtcgaagatatcgactttggcgaggttgac
gatgtcatcggtgccgacatcgatgacggcctcgatgaggatgaggacatggagcacgag
gacgacaaggagttcgaaattgaaggagaggagggagaaacggggcccatgaatatgcaa
gtcttacctctttactctctcctgccaactaaggagcagatgagggtatttgaggatcct
cccgaaaaccaccgtcaggtcatcctggcaaccaacgttgcggaaaccagtttgacgatt
ccgggcatccgttacgtctttgactgtggccggtccaaagaacgccaatacgatcgcttc
agcggagtgcaaacctacgaaatcggctggatcagcaaggccagtgccagtcagcgcgct
ggtcgtgccggtcgtacggggcccggtcactgctacagactctactcctcggccgtctac
gagagagacctgcccgagttcacggaccccgagatcctgcggatgcccgtcgacggcgtc
gtgctccagctcaaggcgatgaacctctccaacgtcgtcaacttccccttcccgacgccg
ccgaaccgtatgggtctccgccaggccgagaagctgctcacctacctctcggccatcgcg
ccggaaggccaaatcacaaaaatcggatcgacaatgtccatcttcccgctctcgccccgc
ttcgcccgcatcctccttgtcggccaccagcacgactgcctgccgtataccatcatgatg
gtggcggcgctctcggccgctgaggtctttgtcccggaacaccaggcaatcccctctctt
gaggcgcgtgacgagtctgagttccgccgcaccgccgacatcatcgccgaggatcgccag
gccaacatcaggcgcctcttcaacgccgcgcacaagaacttctgctacctggacgacagg
tccgacgccatcaagctcctccaggtcgtcggcgagtacgcccatgacccgacggagaag
tggtgcgaggatcacttcgtccggtacaaggtcttgaaggaggtgacgcagctgcgccag
caaatcaccgagctcctccgcgccaacatccccgccttcaagaacctcaaataccaggac
cggctcgacgctccctcggacaagcaggttgcctacctcaagcagatggtggccgccggc
ttcatcgaccacgtcgccctccgcgccgacaaggcccccgtgccgcccgaggtgacgcgc
aagcccggccgcgccatcgacgtgccctacatcccgctctcgccgctcggcgtcggccac
ggcgcggagaagtacatctacatccacccgacgtcgccgctcgcccacctcagcccggcc
gagtgccccgagttcgtcgtgtactcgcagcttcagcgcgcgacgcagggcgcagacgtg
aacaagacgcccaagaccaggatgctcgcgcttacggacgtcacgggcgggcagctcgcg
agcttggccaagggcacgccgctcgtgagctacgggaagccggtcaaggagatttcgtcg
acggcgaatacgcgcgaggtgtgggttgtgccgtacctcagggccgaaggggtcggtggt
caggggtggccgttgccgatgaagaaggtcgtgcagcgcagggttgctgtccttcgccag
tcgtaccggcagagccgcttctacataagcgaatcgggtgagacggtacctttggatgga
aactcctcctcgcccgaatgccaaacctcccaaaacaagagtcaaaaccggccggtgatc
caaacacgtggcgagctgggccggttgaatcggaccgtcgttacttacagagagtccccc
ttccctcttgcggacctggctccgatgatattgcaacagcaaaggtcgacctggaaggaa
aacgaagccctcattgacgaatgcatgagcgccctccgcgagattgagatgaaaatgaca
ctcttctcaggcgtcgccgtggtcacaggcgctgcttcagaaatgggtgagagggaggat
gagatggaatgcaagcctgggactgacagagtgatctcaggcatcggccgccaggtggca
atctcattcgcccgtgagggctgcaagcgcatcgctctgctcgacagagatgaggacggc
gcgctggagacggctcgcatgtgccgggaggccaacggggagacgcgcacttttgtcatg
gagattgacaaccgcaacgacgaggacattgcatcgtgtatggagaatgttgtagaggaa
tggggccggatcgattatgcagttaactgtgctggcatgtttggaccaaaggcaccgtcg
cacctcctgacgcccgccgagtttgacgagatcaccaacatcaactaccgcggcacatgg
ctatgctcgcgggcggagctcacgcatatgattaagcaggaatccatgaagacgcacgac
ggcagaccagggaaccggggggtcattgtcaatgttgcgagtaatctcagcctggttagc
cggccagagacaccggcctacaacgcatccaaggcggctatcttaaggatcattgacacg
cccatgacaagtgaagtctcatcagatgatcccatgatcgcagtagcgccaatgaagcgg
aaaggaacgccgcaagaagtcgccgatgccgtcttattcctctgcagttctaaggcgtct
tttatccacggcgcctcgttgtctgttgacggcggctacgttatcaactaa
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integrated database retrieval system
