Colletotrichum lupini: CLUP02_07966
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Entry
CLUP02_07966 CDS
T08561
Name
(RefSeq) transporter sec22
KO
K08517
vesicle transport protein SEC22
Organism
clup
Colletotrichum lupini
Pathway
clup04130
SNARE interactions in vesicular transport
clup04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
CLUP02_07966
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
CLUP02_07966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clup04131
]
CLUP02_07966
Membrane trafficking [BR:
clup04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
CLUP02_07966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
UBR1-like_wing
SIMPL
DUF5750
Motif
Other DBs
NCBI-GeneID:
73341968
NCBI-ProteinID:
XP_049144101
UniProt:
A0A9Q8WG65
LinkDB
All DBs
Position
4:complement(join(2770072..2770808,2770878..2771062,2771346..2771368))
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AA seq
314 aa
AA seq
DB search
MRRGYAPALRIGIEATSEDTSIQHQPTVDSSFAIPTLLTYERRQILFQIPHASKHIHTMI
RSTQIARLDGLMLCASVDDEQQEAALSEVKSQIKQVLRKLTRNSEPQASIESGAYNLKSV
YPSPVYPFYTERSQSKEEEEEEEGEGEEGTLANLCAQNSYLMDSDITFICITDKSYPRKL
AFTYLSDLAREFTTTYPVSQLHSPSLRPYAFMEFDTFISRTKSTYSDARASQNLDKLNDE
LRDVTKVMTKNIEDLLYRGDSLERMGELSSRLRDDSKKYRRAAVRINWELLLKQYGPLGA
LGFIVIVFFWWRFF
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggggctacgcccccgccctaagaataggcatcgaagctacctcagaggacacg
tcgatacaacaccaacccaccgtcgacagctcctttgctatacctaccctcttgacctac
gaacgacgacaaatacttttccaaataccacacgcaagcaaacacatacacacaatgatc
cgctcaactcaaatagcaaggcttgacggcctcatgctctgcgcttccgtcgacgacgag
caacaagaagcagctctctccgaagtcaagtcgcaaatcaagcaagtcctacgcaagctc
acccgtaactcggaaccccaagccagcatcgaaagcggcgcctacaacctgaagtccgtc
tacccctctcctgtctaccccttttacaccgagaggagccagtcgaaagaagaagaagaa
gaagaagaaggagaaggagaagaaggaactcttgctaacctttgtgcccaaaacagctac
ctaatggactcggacatcaccttcatctgcataacagacaaatcctacccgcgcaagcta
gccttcacctacctctccgacctcgcccgcgagttcacgacaacctaccccgtctcccag
ctccactccccctccctccgcccctacgcctttatggagttcgacaccttcatctcccgc
acaaaatcaacctactcggacgcccgcgcctcccagaacctcgacaagctcaacgacgag
ctgcgcgacgtgaccaaagtcatgaccaagaacatcgaggacctcttgtaccgcggcgac
tccctcgagcgcatgggcgagctcagctcccgcctgcgcgacgacagcaaaaagtacagg
cgcgccgctgtgaggatcaactgggagctgctgctcaagcagtacggccccctcggagcg
ctggggttcattgttatcgtcttcttttggtggcggttcttctaa
DBGET
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