KEGG   Colletotrichum lupini: CLUP02_08088
Entry
CLUP02_08088      CDS       T08561                                 
Name
(RefSeq) RNA recognition domain-containing protein
  KO
K12831  splicing factor 3B subunit 4
Organism
clup  Colletotrichum lupini
Pathway
clup03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:clup00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CLUP02_08088
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:clup03041]
    CLUP02_08088
Spliceosome [BR:clup03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    CLUP02_08088
 Complex B
    CLUP02_08088
 Complex C
   U2 SnRNP specific factors
    CLUP02_08088
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB Nup35_RRM_2 RRM_5
Other DBs
NCBI-GeneID: 73342088
NCBI-ProteinID: XP_049144221
UniProt: A0A9Q8WGA9
LinkDB
Position
4:join(3432340..3432359,3432428..3433493)
AA seq 361 aa
MAQNRHWEQDKDATIYIGNIDERATPAMVYEVMLQMGPIHNIHMPRDRVTQNHQGFGFVE
FRTPGDAEYAANVMNGIKLYGKSLRVNKASADKQKQAEVGAELFVGNLDSMVDEKILYDT
FSRFGPLVNLPKVAREDSGNSKGFGFISYADFESADAAIANLHMQYILSKEVSVQYAFKK
DGKGERHGDAAERELAAQAKKRNIVPEIQAVPPAFLNGPPPAAAPTAPAGFDPSNGLPVQ
VPNPGAPAGFAPPPRGPAQYNAVPPPQGMGGPGMGRGAVLPPAPSGLPARPPQSQGGYTN
PADFHPGAPGFRPPSGPPAPQGFAAPPPNFPMPPPGASGTPPAPPGFMPPPGFNPPGFPR
R
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggcacaaaacaggcattgggaacaagacaaagatgcgaccatctacatcggaaacatt
gacgagcgcgcgaccccggcgatggtgtacgaagtcatgctccagatgggccccatccac
aacatccacatgccccgcgaccgcgtcacccagaaccaccagggcttcggcttcgtcgag
tttaggacgccgggcgacgcagagtacgccgccaacgtcatgaacggcatcaagctctac
ggcaagtccctgcgcgtcaacaaggccagcgcggacaagcagaagcaggcagaggtcggc
gcggagctcttcgtgggcaacctggacagcatggtggacgagaagatcctctacgacacc
ttttcgcgtttcggcccgctcgtcaacttgcccaaggtcgcgcgagaggacagcggcaac
tcaaagggcttcggattcatctcctacgccgactttgagagcgccgacgcggcgattgcc
aacttgcacatgcagtacatcctcagcaaggaggtctcggtccagtatgcgttcaagaag
gacggcaagggcgagcgccacggtgacgccgcggagcgtgagctcgccgcgcaggccaag
aagaggaacatcgtcccagagatccaggccgtaccacccgctttcctcaacggcccgcct
ccggccgctgcgccgactgcccctgccggattcgacccctcaaacggcctgccggtccag
gtcccaaatccaggagcaccagccggattcgcgcctccgccgcggggaccagcgcaatac
aatgccgtaccgccaccgcaaggtatgggcgggccgggcatgggccgcggcgccgtactc
cctcccgcgccgtctggtctgccggcgcggccgccacagtcgcaaggcggctacacgaac
ccggccgacttccacccgggcgccccgggtttccgcccgccaagcggacctcccgcaccg
caaggcttcgctgccccccctcccaacttccccatgcctcctccgggagcttctgggaca
ccgcccgcgccgccgggcttcatgcctcctccgggctttaacccccctggattcccccgc
cgatga

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