Colletotrichum lupini: CLUP02_08306
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Entry
CLUP02_08306 CDS
T08561
Name
(RefSeq) transcription elongation factor spt-4
KO
K15171
transcription elongation factor SPT4
Organism
clup
Colletotrichum lupini
Pathway
clup03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CLUP02_08306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clup03021
]
CLUP02_08306
03019 Messenger RNA biogenesis [BR:
clup03019
]
CLUP02_08306
Transcription machinery [BR:
clup03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
CLUP02_08306
RNA polymerase I system
CLUP02_08306
Messenger RNA biogenesis [BR:
clup03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
CLUP02_08306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Acc5b_avian_CoV
Motif
Other DBs
NCBI-GeneID:
73342306
NCBI-ProteinID:
XP_049144439
UniProt:
A0A9Q8SSQ8
LinkDB
All DBs
Position
4:complement(join(4051345..4051378,4051498..4051751,4051858..4051941))
Genome browser
AA seq
123 aa
AA seq
DB search
MSADNFVAPGQQRYLRACMVCSIVMTYSRFRDEGCPNCEDFLHMAGSQDQIESCTSQVFE
GLITLSNPKRSWVAKWQRLDNYVRGVYAIKVSGQLPDEIRNTLEEEYRIHYIPRDGTETE
VDA
NT seq
372 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgataacttcgtcgcgcccggtcagcagcgctacctccgcgcctgcatggtc
tgctcaatcgtcatgacctactctcgcttccgcgacgaaggctgccccaactgcgaagac
ttcctccacatggccggctcccaggaccagatcgagagctgcacgtcccaggtcttcgag
ggcctcattaccctctcaaacccgaagcgctcctgggtggcaaagtggcagcgcctggac
aactacgtgaggggcgtctacgcgatcaaggtctcgggccagctgcccgacgagattcgc
aacacgctcgaggaggagtacaggatacactatattccgcgcgacggaacggagacggag
gttgatgcttga
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integrated database retrieval system
