Colletotrichum lupini: CLUP02_08366
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Entry
CLUP02_08366 CDS
T08561
Name
(RefSeq) mediator complex subunit Med5
KO
K15147
mediator of RNA polymerase II transcription subunit 5
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clup03021
]
CLUP02_08366
Transcription machinery [BR:
clup03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
CLUP02_08366
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Med5
SSF
Motif
Other DBs
NCBI-GeneID:
73342366
NCBI-ProteinID:
XP_049144499
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Position
4:join(4192057..4192073,4192300..4193204,4193258..4193517,4193571..4193633,4193690..4194202,4194251..4194788,4194838..4195910)
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AA seq
1122 aa
AA seq
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MRLGPRNSYYLSSPSTESRMRPDLPRTHHRRNYLCFPSCASTKASVEVCSYKRPGRDQRA
RLNPPSVLLHDSDNLESARNFIASIANMDGRVIRGVQRAALEQWSEFIAKSLAHRIDPEK
FESYVPFLQAKHPLPPVAVADLFLRPQPHNHESLDPRVPRYLQVLSRLNYIDTPSILKAL
YKYSTSRGHSREAGQLPNVENQTTSFPRWESSYAAEEVMFYRLTKSVAQGTAIQNTGTGL
EIANVMAKWIALFTDAATAFTVDVMGQLHSSQVREEMESARAAFVALLLGVCENQVVLKA
LSKPEAQEIRKALSESLANFVPTIMQSAGPIATRLDMFRTSTLAGFEPVDEQKNKSNAEI
EDLFDSTVALENFVVSELPIVNSRAGLYIYLNAALVGRPLIDDLAIFNYLNNRYQGDVQS
TTVDLILVSFDILANAASRNEGKQAAHLLRSFLMNKLPILIESLSKHMYGPVNAEYCITE
ALSRVDTTTFPTLSSMFDETRSNNPFTDSVREDFCWACCLHGLLRESSIETLLGETPYSS
LPASGRYVKENLVAECLADPERMQALIGELDSKEGNAGAVCQALTEVMGQLCRNKETMSL
KLLCSQLAQKPLSLDVMLMFEKPATILHPLCDLLDNWKYDEDQGEYQPVYEEFGSILLLV
MAFAFRYGLSASDMGIISSDSFVARLLGHGHQSRSLEELSDQEKGHLDGWIHGLFDSEAG
GLGDELMSSCPPQDFYLLVSTLFQNIVVAFSTGHLAEESLRGGIEYLVDTFLLPSLVVAI
TSLANSLWFERPDCQKAIVRVLNSVLAPTSISNEAQAMLSSVMNIVAKPLEHSLRAYQRS
DPKSQEVEPLLKAIKDSIPLSRRTGAADHQELDAWSMGGFSNSIRQTLQQLVQWSIHPTM
DRMPPAYTHRQMLVAMKLLGAKRLLQLLYEDIRQQTETGSGSIIYDVATALVCAPDVVNT
PSNPINFIDNSGNVPAPIPRKLTLREVLKSDAEECKKLQKVDMNLAEIVVRLYRKVETQM
AVSQAEVIQADTMLQTDLGLSLDAGAGSLDDAMAAAAANVAQGDGMSVDNVSLDLGLGGV
GGDLGLGGSSNNGGGSLDLGADDLFSGLGAGDDFQWDNMDLS
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgagacttgggcctagaaactcatactacctatcctctcccagtacagagtcgcgcatg
cgccccgaccttcctagaacacatcaccgccgcaactacttatgctttcccagctgcgca
tctactaaagcgagcgtagaagtatgctcgtacaaacggccagggcgagatcaaagagcc
cggcttaatccgcctagcgtcttactccacgacagcgacaacctcgaatcagcccgcaac
tttattgccagcatcgccaacatggacggtcgcgtaatacgaggcgttcagcgcgccgca
cttgagcaatggtccgaattcatagccaagagtctggctcaccgcatagatcccgagaag
ttcgaatcctatgttccgtttctccaagcaaagcatccgttgccgccagttgccgtcgcc
gatctcttcttacgaccgcaacctcacaatcacgagagcctcgaccctcgagtcccacgc
tacctccaggtcctctctagactgaactatatcgatacgccttcgattcttaaagctttg
tacaagtattcgacctctcgtggccactcccgagaagctggacaattgcccaatgtcgaa
aaccagacaacaagcttcccacgatgggagagctcgtatgcggccgaggaggtcatgttc
tacaggctcaccaagtctgtagcacaagggaccgcaatacaaaacacagggacgggtctt
gagatcgccaacgtcatggccaaatggattgcgctcttcaccgacgccgccacagccttc
acggtcgatgtcatggggcagcttcacagtagccaggtaagagaagagatggaatcggcg
cgtgccgcattcgtagctttgcttctcggggtgtgcgaaaatcaggttgttctcaaggct
ttgagtaaacccgaagcccaagaaatcagaaaggcattgtccgaaagcctcgccaacttc
gtcccaaccatcatgcaaagtgctggccctatcgcgacccgtctcgatatgttccggacg
agtacgctagcaggctttgagccagtcgacgagcagaagaacaagtcgaatgccgagatc
gaggacttgtttgactccacggtagcattggagaactttgtagtgtctgagctaccgata
gtcaactcgagggctggtctttacatatacttgaatgctgcactagttggccggccattg
atcgatgatctagccatcttcaactacttgaacaatagataccagggcgatgtacaatca
acaactgttgacctcatcctggtctcgttcgacatactggccaatgccgcctcccgcaat
gaagggaaacaagcggcacatctattgcgctcatttctcatgaataaattaccgattctg
attgaaagtctgagcaagcatatgtacggcccagtgaatgcagaatactgcatcacggaa
gctctcagccgcgtcgacacgaccacctttcccacactatcatcaatgttcgatgaaacc
agaagtaacaatcccttcacagactcagttcgggaagacttttgctgggcttgttgtctc
cacggcctattgcgggaaagcagtattgaaactctccttggagaaacaccctattcatcc
cttccagcaagcgggagatacgtcaaagaaaatcttgtcgcagaatgccttgcagatccg
gagagaatgcaggctctgattggggagctagacagcaaagaaggaaacgccggcgccgtg
tgccaagctttgacagaagtaatggggcagctttgcaggaataaggagacaatgtccctg
aaactattatgcagtcagttggcgcagaagccattgtctcttgatgtcatgctgatgttc
gagaaacctgcaacgattcttcaccctttgtgcgaccttctggacaactggaagtacgat
gaggaccaaggagagtatcaacccgtgtacgaggagtttggctcaattctgcttctcgtt
atggctttcgcatttcgttacggtctttcggcatcagatatggggatcatatcctctgac
tcttttgtggcaagactgctcggccacggccaccaaagtcggtctttggaagagttatca
gaccaagaaaagggccatttggatgggtggatccacggcctctttgactcggaagcgggc
ggactaggcgatgagctgatgtcgtcctgcccgcctcaggacttctacttactagtgtcg
actctgtttcagaacatcgttgtagcgttcagtacaggacacttggccgaagagagcctc
agaggaggcattgaatatcttgtcgatacgttccttctgccatccctcgtcgttgccatc
acgtctcttgccaactcattgtggtttgagcgtcctgactgccaaaaggcgattgtcagg
gtactcaactctgttttggcaccaacatctatatccaatgaagcgcaagccatgctctct
tctgtgatgaacatagttgctaagccgctggagcattccctcagggcataccaacgatca
gacccaaagagtcaagaggttgaaccgcttttaaaggcaatcaaagatagtatcccactc
tccagaagaacgggagccgccgaccaccaagaactggacgcttggtcaatgggaggattc
tctaattctatccgacagacgctacagcaattggtgcagtggagcattcacccaacaatg
gacaggatgcctcccgcgtacacccatcgacagatgttggtggcgatgaaacttcttggt
gcaaaacgcttactacaactcctttacgaagacatcagacaacaaacagaaacgggcagc
gggagcatcatttacgatgtggcaacagcattagtctgcgcgcccgacgtggtgaacacg
ccgtcgaacccgatcaactttatcgacaattcaggcaatgtaccggctcccatcccgagg
aagcttactctgcgagaggttctgaagtcagatgccgaggagtgtaaaaagctgcagaag
gtcgacatgaaccttgccgagattgttgtgaggctgtaccgcaaggtagagactcagatg
gccgtatcccaggctgaggtcatccaagcagacaccatgctgcaaactgatctcggtctg
agcttagacgctggcgcaggctcactcgatgatgccatggctgccgcggctgccaatgtt
gcgcaaggcgacgggatgtctgtggacaacgtcagtcttgatctgggcctaggaggtgtt
ggcggtgatcttggtctcggaggctcatcgaataatggtggagggtcactggatctcggt
gccgacgacctcttcagtggcctcggtgctggtgacgattttcaatgggacaacatggac
ctatcttag
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