Colletotrichum lupini: CLUP02_08437
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Entry
CLUP02_08437 CDS
T08561
Name
(RefSeq) transcription factor SPT8
KO
K11360
transcriptional activator SPT8
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clup03021
]
CLUP02_08437
03036 Chromosome and associated proteins [BR:
clup03036
]
CLUP02_08437
Transcription machinery [BR:
clup03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
CLUP02_08437
Chromosome and associated proteins [BR:
clup03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
CLUP02_08437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_SPT8
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
73342436
NCBI-ProteinID:
XP_049144569
UniProt:
A0A9Q8SSU9
LinkDB
All DBs
Position
4:join(4480864..4480882,4480939..4482769,4482825..4483056)
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AA seq
693 aa
AA seq
DB search
MDDDDRDSNASSDNDQNDQNDQDEVMEDVDDAEGDMENEEEDNEDDQEDNDREETGDDAQ
EKGDDAAARDARVPSRAGSAGAGASPGIKSGSPLLSSSLFPSVRPEAVNARLYDIVPTMA
APQATSVNAVAITPDLRFWMTGGSDGYIRKYDGPGTINGKQLLTVAQRHPFVDSVVKAGI
LMSYWENEEPGPPNPRGNEEHILSPVYSLAVHSQALWLLSGLESGGINLQSVRHDEGKRI
TCLQQHTNAVSVLTLAQDEKSVLSGSWDKNIFDWDLNTGAVKRSYDGSGGQTSAIELRPV
NGAPIPAEAMEEEIKPDPTFTSNNSKPPQNGTLDDINGIEAPPPALAGEGAEGQASPAHE
SLFGGSDTGSLFGDNVAGNYGGDDDDEFSRAMGDMGMPTLHDGSGQDGGMDHSADIDMTN
AFNADATPAPPVQAPGSSSPEATRNQPPAPAPALEASATDMTSALDGAGDATTELPVPDF
PEIPSLPDMQTDDANPGSPSMIFASDPPPPAMDPTQSADTVFFSAAIDGNIRLWDRRVQD
PVARIGSQRGVPPWCMGACWSPDGNWIYAGRRNGTVEEYNIHKARSGWAPERTLKFPAGS
GAVSAVRAMPNGRHLVCASHDILRLYDLKDTRAFKHSTVPFLIIPGPPRAGVISSLYIDR
TCRFMISTAGTRGWEGTSTEVLIGYEIGVTEEK
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgacgatagagactcaaacgcgagctccgacaatgaccaaaacgaccagaac
gaccaggacgaggtcatggaggacgtagatgatgccgaaggggacatggaaaacgaggag
gaagataacgaagacgaccaggaggataacgaccgcgaagaaacgggcgatgatgcgcaa
gaaaagggcgacgacgcagctgcaagagatgcaagagtgccttctagagctggttcggcc
ggcgcgggggcgtcgccagggataaagagcggatctccactgctatcctcaagtctgttc
ccaagcgtccgacccgaagccgtcaatgcccggctgtacgatattgttcctacgatggct
gcgccgcaggcgacgagtgtaaacgcagttgccattacgcccgatcttaggttctggatg
acaggaggctccgacggctatatccgaaagtacgacgggcctggtactataaatggcaaa
caactcctcacagtagcgcaaaggcacccctttgtcgatagtgtcgtcaaggcgggcatt
ttgatgtcatactgggagaatgaggagccaggcccgccgaacccgagagggaacgaagaa
cacatcctatcacccgtttactcattggctgtccactcgcaggcgctatggcttctttcg
ggtctcgaatctggaggcattaatcttcaaagtgtaaggcatgacgaaggaaagcgcata
acatgcttgcaacagcatactaatgctgtgagcgtgttgacactggcacaagacgagaag
agcgtcctaagcggcagctgggacaagaacatcttcgactgggatctcaacactggcgct
gtcaaacgttcttatgacggtagcggaggtcagacttctgctatcgagcttcgcccagta
aatggtgcaccgattccagccgaggcaatggaggaagaaatcaaacctgacccgactttt
acctcgaataacagtaagcctcctcagaacggcaccctagacgatatcaacggtattgaa
gctccgcctcctgcgttggccggcgaaggcgctgagggacaggcgtcacccgcacacgag
tcgctctttggcggtagtgatacaggctcgctatttggcgacaacgtagcaggcaattac
ggcggcgatgacgatgatgaattctcgagggcgatgggagatatgggaatgcccactctt
catgatggctcagggcaggacggcggtatggaccactcggccgatatcgatatgacaaat
gccttcaacgccgatgccaccccggcgccgccggtccaggcaccaggaagcagcagtcct
gaagccacaagaaatcaacctccagcaccggcaccggctctagaagcgagtgcgacagat
atgacctcggcgctagacggcgcaggcgatgctacgacggagctgcctgttccagatttt
ccggaaatcccttctctacccgatatgcagacagatgatgcaaatcccggttcaccctcc
atgattttcgcctcggatcctcctccaccggccatggacccaactcaatcagcggacacg
gtcttcttctccgcagccattgatggtaatatcagactatgggatcggcgtgtccaagac
cccgtcgcaaggataggcagtcagagaggcgtgccaccttggtgtatgggtgcctgctgg
agtccagacggcaattggatctacgctggcaggcgaaacggaacggtggaggagtacaac
atccacaaggccagaagcggctgggcgccggagaggaccctcaagttcccggctggaagt
ggagccgtgagtgcggttcgagcgatgccgaatggccgtcatctcgtctgcgcttcccat
gatattcttcgtctgtatgatctcaaggacactcgagctttcaagcattccaccgtcccc
ttcctgattattcctggtccgcctagagctggtgtcatttcgtcactctacatcgatcga
acgtgccgcttcatgatctcaactgctggaacgcgcggttgggaaggtacaagcaccgag
gttctgattgggtacgaaatcggtgtcaccgaagaaaagtag
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