Colletotrichum lupini: CLUP02_08542
Help
Entry
CLUP02_08542 CDS
T08561
Name
(RefSeq) WD repeat-containing protein
KO
K20409
SEA/GATOR complex protein SEA3/WDR59
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clup04131
]
CLUP02_08542
Membrane trafficking [BR:
clup04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
CLUP02_08542
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_RIG_2nd
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40
Beta-prop_EIPR1
WD40_Prp19
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
zf-RING_16
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WDR55
RWD
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
zf-RING_UBOX
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
73342540
NCBI-ProteinID:
XP_049144673
UniProt:
A0A9Q8SUH9
LinkDB
All DBs
Position
4:complement(join(4812374..4816841,4816901..4817058))
Genome browser
AA seq
1541 aa
AA seq
DB search
MPHFDQLDAPKKGKPIKSAFDSESFDADGTIHVAGLVGSATIAPSQRDVALASPEGLSII
DLDSPYNPPRRLSSHGSPWLVTDVQWSPFAVRDYWVVSTANHRALVWNLNLRDDSTSGAI
EHSLQGHSRAITDINWSAHHPDQLASCAVDGYVHCWDLRRPRQPVLTFCDWFAGATQVKY
NRQDPHILASSHDRWLHIWDERRPSEPLKSIGAHTSKIYGIDWNRTTSTKIVTCSLDKHI
KFWDYASDQDVPDRVIRTEFPVWRARHTPFGQGLLAMPQNEPGDLYLYDWRTPPKDPEEG
PTEPVAVFPGHGNHKAKEFLWRSRGSITEDALDNRDFQLVSWGEDNELRLQQVDPSILES
VGYVKGMAANKNVVLTRKGAAYKTFRTVEDTVSRDRRSATMSDPRNSAQYRQSALTMGMR
SGPTTYSKLGAAWKGSSMKAKSTSREMDRSQAHIGWMKGIMMNKRKTSTDSPRRADSKDS
SMFSPGYMDDDKWGEPETIQEEFLRISMQLPKVKWEHIDMDNLTLNASLNGPWGANSDPI
FIKVTVDIPSNYPKAKAPRFYIEKTGFMSDKTHRKIEHEIHELCQQFLERKQNCLDVAFS
YLLGEIDLAASTNFFKNVKDLDDPLDGLGSESSSEDENDIPAGGSASMSQELPPNAEAES
TLAPNNRPTIPPLPRFCGARFSNDGRLVCFFPTKEEKARALLFTPAEPMRERSKGEPVFA
GFGRLAHDSPPGKRYGNDEMSATDEQSDSDVSTGSSSSSDSESTSINKMSLWYQPRHRFK
RTWSDNRSVRSSGGGTGVGTGTGTGSLRRRPGAKSKNVVSLHDLSDILPAKKEFAEDYAI
FGDGAEVCEHNAQVAEKHGCQDLVDVWRYLSLILRRDIPLELSNMDRHQNSILIIARDAL
ARFRHEGSPVPKTINGKDTADFNGRVKWGNHPLARDFISDLFDYFEKTADIQMLAMLSCI
FSEAFTEDSVAYAESHLTQPDTPLPMKTPAFSLDYFPTDASLWTYNTRSQTNSAITTPRT
LHTPIRYSGSQGSAEEMLWTGDPGSNSYSCGETPPPRGKEYLGEGDQTPSLSTSPSGRTL
SRANSGLTSSFAINFPRPFSGVATGTTTAASSPPNHGRKRPSPAETILSTLAPSAPGAVT
WGGSTIMGDSGTARTSLSDDEVYRDDLFSMVPIGVSVHMEDQTIFDDDGWMTTPLLEATR
ADMYATYRYVYAEILQMWNQPLARLEIMKFNVLQQGQGGTGSIDDFHDTYSIADTSTTIQ
QHHHDQQHQSHQAQHHQQQPHNTSPILLGKKEQLQALVASGRGLDVTGVCRVHETQLEPL
KYTSASATRSGGAVGACDRCRRPQYQLLCVYCREPVDALYPPCLGCGCAFHEACLAEWHA
AGEVTCPAGDECNCVEEASSGQVESWAAMMGALRKGQQPASGISSAPSGGVMGRGFVLPP
PTIEEPDDEEVERGDWESVASSAGIPSRMQGGGAGSGAVMSAARISLGNRLKKSAGDTAA
AWSRASSLRKGRGGHPGAGVGPDPGLGSGNGAAGGTWRSAK
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacttcgaccagcttgatgcgccgaagaagggcaagccgatcaagtcagccttc
gacagcgagagctttgatgcggatggcacgattcacgtcgccggtctagtaggatcggcg
acgatagctccttctcagagagatgttgccttagcatcacccgaaggtttatccattatt
gatttggactcaccttacaatcctcctcgtcgactcagcagtcatggctccccttggctt
gtcactgatgtccaatggtcgccctttgccgttcgcgactactgggtcgtgtccactgcc
aatcatcgcgcgcttgtatggaacctcaacttgagagatgactcgacatcgggggccatt
gagcactcacttcaaggccacagcagagccatcaccgatatcaactggtccgcccaccac
cccgaccagctcgcttcgtgtgctgtcgatggttacgtccactgctgggatctcagacgc
ccgagacagcctgtccttactttctgcgattggtttgccggcgccacgcaagtcaagtac
aaccgccaggacccgcacatcctggcttcatctcacgacaggtggttgcacatttgggac
gaaagacgaccaagcgagcccctgaaatcaatcggcgcacacacctcaaagatctacggg
attgattggaatcggacaacgtcaaccaagattgttacttgctctttggataagcacatc
aagttttgggactatgcgagcgatcaagatgtcccggatcgcgttatacgtaccgagttc
ccggtgtggcgcgctcgtcataccccttttggccaggggctccttgcgatgcctcagaac
gaaccaggcgacctgtacctgtacgactggcgaacacctcccaaggaccctgaggaaggg
ccgactgagccagtagcagtatttcctggccacggcaaccacaaggccaaggagttcttg
tggagaagtagagggagcatcaccgaagatgcgctagataacagagacttccagctcgtc
tcttggggagaggataatgagctgcgcctgcagcaagtcgacccgtctattctcgagtct
gtgggatatgtcaaggggatggcggccaacaagaatgtcgtcctcacacgcaaaggcgct
gcctacaaaactttccgaacggttgaggacacagtcagccgagacaggaggagtgccaca
atgagcgatccccgtaatagcgcgcaataccgtcagagtgctctgactatgggtatgcgg
tctgggccgacaacctattccaaacttggtgcggcttggaagggctcatcaatgaaagcc
aaaagcacttccagagagatggatcgtagccaggcacatatcggctggatgaagggaatc
atgatgaacaagcgcaagacatctacagacagccctagaagggcagattcaaaggactct
agcatgttcagcccaggttacatggacgatgacaagtggggagaaccagagactatccag
gaagagtttctccgcatcagcatgcagcttcccaaggtcaaatgggagcacatcgacatg
gataacttgacgctcaacgcatccctcaatggcccgtggggcgccaacagcgaccccatc
ttcataaaagttacagtcgacataccatctaactatcctaaagccaaagcaccaagattc
tacattgagaagaccggcttcatgtcagacaagacgcatcggaagatcgagcacgaaatt
catgagctttgccaacagtttctggagcgaaagcagaattgcctggatgttgctttctct
tatctgttaggcgagatcgacctggcggcgagcacgaatttcttcaagaatgtgaaggat
cttgacgatccattagacggccttggttccgagagctctagcgaagacgagaacgatatc
ccggccggcggttccgcatccatgtctcaagaattgcctccgaacgcagaggccgaaagc
accttggcaccaaacaacaggcctacaattccacccttgccacggttctgcggtgcccgg
ttttccaatgacgggaggctggtgtgcttcttcccaaccaaggaagaaaaggcaagggca
ttgctattcacgccggcagaacccatgcgggagaggtcaaaaggggagcctgtattcgcc
ggtttcggccgtcttgcgcatgattctccgcctggaaagcgatatggtaacgacgagatg
tccgctacagacgagcagtccgactctgatgtctccaccggttcatcctcttcgagtgac
tcggaatcaacatctatcaacaagatgagcctatggtatcagcctcgacatcgtttcaag
cgaacttggagtgacaatcgctctgttcgatcaagcggtggcggcacgggagtgggaacc
ggaaccggcacaggatcgcttagaaggcgaccaggcgcaaaatcgaagaacgtcgtctcc
ctccacgacttatcggatattctgcctgcgaagaaggaattcgcagaagactatgctata
tttggggatggtgctgaggtctgcgagcacaatgcacaggtcgcagagaagcatggctgc
caagatctggtagatgtctggcgctacctctcactgattctccgccgagatatcccactg
gaattgtcaaacatggaccgtcaccaaaactccattctgatcatagccagagacgctctt
gcgcgattccgtcacgagggttcgccggttcccaagacgattaatggcaaagacactgct
gacttcaacgggagagtgaagtggggcaatcatccgctagcgagggatttcatcagcgat
ctctttgattactttgagaagactgcagatatccagatgctagctatgttgtcctgcatc
tttagtgaagcattcaccgaagacagtgttgcctacgccgaatcgcacctcacgcagcca
gacacaccgctgccgatgaagactccggcattttcactcgattacttccccacggatgca
tctctttggacttacaacactaggagtcagacaaattcagccatcaccacgcctagaaca
ttgcacacaccaatccgatactctgggtcacaaggttctgctgaagaaatgctttggact
ggggacccaggctcaaactcttactcgtgcggcgagacaccgccaccaaggggtaaggaa
tatctcggggagggggatcaaacgccaagtctctccacgtcgcccagtggaaggacgctg
tcgagagccaactcgggtctgacctcgagcttcgctatcaactttccacgacccttcagc
ggtgttgcaacggggacaacgaccgcagcatcatcgccgcctaaccatggtcgtaagaga
ccgagtccagcagagaccatattgagcaccctcgcccccagtgcacccggtgctgtcact
tggggaggctccaccatcatgggcgactcgggcacggctcgcacctccctctcggacgac
gaggtttaccgcgacgatctattctccatggtacctatcggagtgtctgtccatatggag
gatcagaccatattcgatgacgacgggtggatgaccacgccgcttctagaggcgacccgc
gctgacatgtacgccacgtatcgctatgtctacgccgagattctacaaatgtggaatcag
cctctggctcgcctggagattatgaagttcaacgtgcttcagcaaggccagggagggact
ggctcgattgacgatttccatgatacctacagtatcgccgatacttcgacaacaatccag
cagcatcaccacgatcaacagcaccagagccatcaggcccagcatcaccagcagcaaccg
cacaatacctccccgatcctcctcggaaagaaggagcagctccaagctcttgtcgcttcc
ggccgcggtctcgacgttaccggcgtatgccgcgtccacgagacccagctcgagcctctg
aaatacacttccgcctccgcgactcgctccggcggcgccgtcggtgcgtgtgatcgctgc
cgccgcccgcagtaccagctcctctgcgtatactgccgcgagcccgtcgacgccctgtac
ccgccgtgtctaggctgcggctgcgccttccacgaggcgtgtctcgcggagtggcatgcc
gccggcgaggttacctgtcctgctggcgacgagtgtaactgcgtagaagaggcgtcgagc
gggcaggtcgagtcgtgggctgccatgatgggcgcgctgaggaagggtcaacagccagcc
tcgggtatttcttctgctccctcaggaggcgtcatgggtcgcggattcgtgctgccgcca
cctactatcgaggagccggatgacgaggaggttgaaaggggcgactgggagagcgtggcg
agttccgcggggatccctagccggatgcaagggggaggagcgggtagcggtgcggttatg
agtgccgcgcggatcagtctgggtaacaggcttaagaagtctgcgggcgataccgcggct
gcttggtcccgtgcttctagtttgagaaagggtaggggtggtcatccgggagctggggtt
ggacccgaccccggactaggcagcgggaacggagctgctggtgggacttggaggagcgcg
aaatga
DBGET
integrated database retrieval system
