Colletotrichum lupini: CLUP02_09046
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Entry
CLUP02_09046 CDS
T08561
Name
(RefSeq) WD domain-containing protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clup03009
]
CLUP02_09046
Ribosome biogenesis [BR:
clup03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
CLUP02_09046
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
EIF3I
Beta-prop_EML_2
WD40_WDHD1_1st
NBCH_WD40
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WDR55
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WDR54
Beta-prop_VPS8
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
73343037
NCBI-ProteinID:
XP_049145171
UniProt:
A0A9Q8SVU7
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All DBs
Position
4:complement(join(6534961..6535947,6536010..6536451,6536563..6536773,6536869..6536938))
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AA seq
569 aa
AA seq
DB search
MRHAAGSSASSHLKLNFSLSTFLTIGPVLSLPPWLLLCLSRSHFENLERSESSIKPFNVV
SKTRYPTSPRRIDATPISQPRGTDSLPEHEDKVFRSQVISTVSDSDEPAAYSAFTTSSGY
RLSVTHPSTMLSEEFYSCICGPPIAANTAVSKDIGIYAHTLSPSYTVKSTLKRSATPAHC
LAISDSHVFAAQHEKSQVHVYSRSRGIQETVVTFPERIRSLALIDDVLALGTSEGRLILW
ETCTGRQLVTPPCHVQAVSCLAVTPYHILTGSEDSNIHVWTISRLLELDASVESEPDRTL
ANHRAAITSLAVSGSVNPETNICVSSSKDKTCIIWNYQTGDVLRTLLFSTAPLCVSMDPC
GRAVFVSSEDRALYLVELFGEKPLIGPNSTESSSTVVQVNSPIGVADEDAGSALCLAPNH
DGTTILSGHAKGKILQWQLAENGHPTELTDLNASVTNLVFPPLLKTPRPTKAVAVVKPTQ
TERQFTFTSQLNTSLEQETRFGKMLNGFGLPDDALEAAILSFQESHAQQCATDEEAQQET
EELWDIINEQRALHKLAMQPYHEAKSSHT
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgacatgcagccgggtcttcagcctcatcacatctcaagctcaacttctcattatca
actttcttaaccattggtcctgtactttcgctcccgccctggctcttgctctgcctctcg
cgttcgcactttgaaaacctggagagatctgagtctagtatcaagcccttcaacgtggtt
tccaagactcgataccctacttcgcctcgacggatcgacgccacgcccatctcgcaacct
cgtggcactgattcacttcccgagcacgaggacaaagtcttccgctctcaggtaatctct
acagtctcggattccgacgagcccgcggcctattcggcctttaccacctcttccggatac
cgcctctctgtcactcacccctccaccatgttatcggaagaattctactcctgtatctgc
ggcccgcctattgcggcaaacacggccgtatccaaagatatcggcatctacgcccatact
cttagccccagctacacggtcaagtcaactctcaagagaagtgctaccccagcccactgc
ttagctatcagtgactcgcatgtctttgccgcccagcacgaaaagtcccaggttcacgtc
tactcaagatcgcggggcatccaagaaacagtcgttacctttccagaacgcattcggagc
ttggcgttgattgacgatgtcttggcgttaggcacctccgagggcaggttgatcctgtgg
gagacatgcactggtcgccagctggtcacaccaccttgccacgtccaagccgtttcgtgt
ctggccgtcacgccctatcacatccttacaggctccgaagattccaacattcatgtttgg
acaatctcccgtctgctagagctagatgcttctgtggagagtgagccggaccgtacgctc
gccaaccacagggctgccatcacatcgctcgctgtcagtggtagtgtcaacccggaaacc
aacatttgcgtctcgtccagcaaagacaagacttgcatcatctggaactatcaaacgggc
gatgttctacgtacactattgttctccacggctccgctgtgcgtttccatggatccctgc
ggtcgtgccgtcttcgtttcatctgaggacagggctctctacctcgtagagctcttcggt
gagaagccgctcattggtccgaatagcactgaatcatcgtcgactgtcgttcaagtcaat
tcaccgattggagttgctgatgaagatgctggttcggctttgtgcttggcaccaaaccat
gatggcacaacaatcttatccggtcatgcaaaaggcaaaatcttgcaatggcagctggcc
gaaaacggtcaccccacagagttgacagacctcaatgcctctgtgacgaacttggtgttt
ccgccattgctgaaaacacctcgacccacaaaagctgttgcagttgtcaagcccactcag
accgagcggcaattcacctttacatctcaactaaacacaagtctcgaacaagagacgaga
ttcggcaagatgctcaatggctttggtttgcctgatgatgcgctcgaggccgccattctt
tcgttccaggagtctcatgcacaacaatgtgccacggatgaagaggctcagcaagagact
gaagagttgtgggatattattaacgagcaacgggcgctacacaagctggctatgcagccg
tatcacgaagccaaatcatctcatacctga
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