Colletotrichum lupini: CLUP02_09263
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Entry
CLUP02_09263 CDS
T08561
Name
(RefSeq) nucleoporin nup44
KO
K14308
nuclear pore complex protein Nup54
Organism
clup
Colletotrichum lupini
Pathway
clup03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CLUP02_09263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clup03019
]
CLUP02_09263
Messenger RNA biogenesis [BR:
clup03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CLUP02_09263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_57_C
Adhesin_P1_N
DivIVA
YliH
CDT1_C
Motif
Other DBs
NCBI-GeneID:
73343252
NCBI-ProteinID:
XP_049145386
UniProt:
A0A9Q8WI89
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All DBs
Position
4:join(7341347..7341662,7341727..7342373,7342430..7342531)
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AA seq
354 aa
AA seq
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MSLFGAPKPAGQTGGLFGGGSFGGSTLGQSTQQQPQQQQQQQQSGMSLFGGQNQTQGGAF
GNSMAQSQQPQQQQQQQQQQQQMPSLSQSQAQLSSSLWQPGRDTPQNQKPIPEQMSLIFE
KWNPTNPNCAFKHYFYNKVDEASVPFYKPGPHEDPSDWEEALQKKPAPGYIPVLCTGFSG
VAARLQTQKKVVGELNVRLHQINASLDAILSRHDLETSVRALAARRRHVVLRERCLALAA
RVQVLRNRGYALSGDEDDLRLKLAELERNVQDPALAAREEELWSRLIVLRDYADQLMKET
NKPAFASGEGLSEETEHKTKKVLEDYEKQIQHLKKEVESITKDFADWEKERNPS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgttcggcgcaccaaagcccgctgggcagactggaggtctctttggaggaggt
agtttcggcggcagcacattaggacagtcaacacagcagcagccacaacagcaacaacag
cagcagcaatccggcatgagcttgttcggaggacagaaccagacccagggaggcgcattc
ggcaactccatggctcagtctcagcagccgcagcaacaacagcagcaacagcagcagcaa
caacaaatgcccagcctgtcgcagtcgcaagcacagctctcgagctcactctggcaaccc
ggaagggatacgcctcagaaccaaaagcccattcccgaacaaatgtccctcatcttcgag
aagtggaaccccacgaaccccaactgcgcattcaagcactacttctacaacaaagtcgac
gaagcctccgtccccttctataagcctggcccacacgaagacccgagtgactgggaggag
gcgctgcagaagaagcccgcgccgggctacatcccggttctttgcacaggcttctccggc
gtcgcggcccgcctccagacgcagaaaaaggtagtgggggaactcaacgtgcgcctgcac
cagatcaacgccagtcttgacgccatcctctcacggcacgacctcgagaccagtgtgcgt
gcccttgcggcccgtcgccgtcacgtcgtccttcgcgagcggtgtctcgcgctggctgcc
cgcgtgcaggtgctgcgcaaccgtggatacgctctcagcggtgacgaggatgatttgcga
ctcaagctggcggagctggagcgcaacgtgcaggaccctgctctggcggcgagagaggag
gagctctggagccgcttgattgtgctcagggattacgcggaccagttgatgaaggagacg
aataagcctgcctttgcgagcggcgagggtttgagcgaggagactgagcacaagacgaag
aaggtcttggaagattatgagaagcaaatccagcatctcaagaaggaagtcgagtccatt
acaaaagactttgcggactgggagaaggagcggaacccgagctag
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