Colletotrichum lupini: CLUP02_09296
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Entry
CLUP02_09296 CDS
T08561
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clup03032
]
CLUP02_09296
03029 Mitochondrial biogenesis [BR:
clup03029
]
CLUP02_09296
Enzymes [BR:
clup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CLUP02_09296
DNA replication proteins [BR:
clup03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
CLUP02_09296
Mitochondrial biogenesis [BR:
clup03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
CLUP02_09296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_19
AAA_30
Cauli_VI
Pif1_2B_dom
Herpes_Helicase
Mg_chelatase
AAA_5
DEAD
Viral_helicase1
ABC_tran
AAA_22
DUF815
Cut12
Sigma54_activat
AAA_16
AAA_29
AAA
AAA_14
NPHP3_N
MeaB
NTPase_1
Rad17
NB-ARC
nSTAND3
AAA_28
T2SSE
AAA_7
Motif
Other DBs
NCBI-GeneID:
73343285
NCBI-ProteinID:
XP_049145419
UniProt:
A0A9Q8SVE4
LinkDB
All DBs
Position
4:join(7415786..7415807,7415871..7416230,7416291..7416319,7416377..7416687,7416772..7417699,7417761..7417880,7417959..7418151,7418224..7418579)
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AA seq
772 aa
AA seq
DB search
MAFKQTTLHFGPKRAPGGSLSPPSPKRQRFQPEPDHNDLTRHGDTDDDRQEASSGSQAEK
DAEPSSNPPQTSVADKVNDMMRKYTSGIPTELSGAKKYYVVWNGTETGIFESWGKCQPLV
ERYPGAGHKKTTTYKDAVDLLRNKLTEKLEAEEPRSVPQPQPCTASPNTYESTPRYTPPT
PNSRIPGSAAPSDVAAIAADAGEPQAQSFDPAPDPCEPPLCQEQQAAMDLAMAGHNLFIT
GSGGCGKSVLVKALHKMFKAKERKVHLIAPTGIASVNIGGRTMWNYAGWTPDDFSEPFGI
LVGKSRQKKNKNRIVGTHVLIIDEISMVENQFFQRLSQVMGRIRRKAAPNNPQSQMEVRG
AFGGVQVIAVGDFCQLPPVEPFQHCLECGSEMQQEKVGNSVRSYFCPQGVSDEGPQQNTH
GYFMEHDKWAFKSSEWVRCNFKYVHLKKVHRQTDEDFVRILQTCRLGEILSQRDIDLLLN
HPAQVENATRLFSHRLQAQEHNESQLKQLHSPSRKYWCLDYANTNNSTDEELDRLIDYYT
ASAGYLIRRAMRDSDPEAPPSRQPLSRLGDHRYAQFLELKLNMPVILLANIDLDSGLCNG
SQGKICGFVSRSKFERPTEPKRKNYKKDLSAFDAAMERFRLTEMFLTDKGAPELYPEVEF
NNGQRRVIGPDCAVNELGTKHPHMLVSRTQLPLAPGWAMTIHKSQSLSLDRLIIDLGSVF
EKGQAYVALSRARSLQGLQIEGTDEYMLQSGLELDSEVRRFLEELERSAEGN
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaaacaaaccacactccatttcgggcccaaacgcgcgccgggcggttccctc
tccccaccatcacccaaaagacagcgattccaacccgaacccgaccacaatgatttgacg
agacacggcgacactgacgatgaccgtcaagaagctagctccggctctcaagcagagaaa
gatgctgagccttccagtaaccccccacaaacgtcagtagcagacaaagtgaacgacatg
atgagaaagtacacgtcgggcataccaacggaactttccggcgccaaaaagtactacgtg
gtatggaatggaacggaaaccggtatattcgaaagttggggcaaatgtcagccgttggtt
gaaagatatccaggggcagggcacaagaaaacaacaacgtacaaagacgctgtggatctc
ctgcgtaacaagttgacagaaaagctcgaggcagaagagccaaggtctgtacctcaaccg
caaccttgtactgcatcgccaaacacatatgagagcacacctcggtatactcctcccacg
cctaacagccgtatacctggcagtgctgcgcctagcgatgttgcagccatagctgctgat
gcgggcgagccccaagcccagagcttcgacccagcaccagacccttgcgagcctcctctt
tgccaggaacaacaagccgccatggatcttgccatggctggacataaccttttcatcact
ggatcgggcggatgcggcaagtctgtcctcgtaaaggccttgcacaagatgttcaaagcg
aaggaacgaaaagtacacctaatcgcacctaccggcatcgcttctgtcaacatcggtggt
agaacgatgtggaattacgcgggctggacaccggatgatttctcagagccattcggtata
ctagtgggaaagtcgcgacaaaagaaaaacaagaatcgaatagttggtacccatgttctt
atcatcgacgaaatcagcatggtcgagaatcagttctttcaacgacttagtcaggtcatg
ggacgaattcgacgcaaagcagccccgaataacccccagagtcagatggaggttcggggc
gcttttggcggcgtccaggtcatcgctgttggggatttctgtcagctgcctccggtagag
ccattccagcattgtcttgaatgtggctcggaaatgcaacaggaaaaggtcgggaactca
gtccgttcatatttctgccctcaaggagtcagcgatgaagggccgcagcagaatacccat
gggtatttcatggagcacgacaaatgggccttcaagtcttctgagtgggtgaggtgcaac
ttcaagtacgtccacctgaagaaggttcatcgacaaacagacgaggactttgtcaggatt
cttcagacatgccggttaggcgaaattctcagccagagagatatcgacctactgctaaat
catcctgcccaggttgagaacgcaactcgtttgttcagtcatagactgcaagctcaagag
cataacgaatctcagctcaaacagctccatagcccgtcccggaaatattggtgtctcgat
tatgccaatacaaataatagcacagatgaagaacttgatcgtctgatcgattactacacg
gcaagtgctggctacctcatccgtcgagctatgcgagattcggaccctgaagcacctcct
tcgcggcaaccgttgtcccgcttgggcgaccatcgctatgcccaatttctagagttgaag
ctcaatatgcccgtcatattgcttgcaaacattgatctagacagcggcctgtgtaacggc
agtcagggcaaaatctgcggctttgtctcacgctccaagtttgaacgtcccacagaacct
aagcgaaaaaactacaagaaggatttgtcagctttcgatgctgctatggaacgttttcgt
ctgacggaaatgttcttaacggacaaaggtgcgcctgaattatatcccgaggtcgaattc
aacaacggccaacgccgcgtcattggcccggattgcgcagtaaacgaactcggcaccaaa
cacccgcacatgctcgtatctcggacacagctacctctcgctccaggctgggccatgacc
atccataagagccagagtctgtctcttgaccgcttaatcattgacctgggctctgtcttt
gaaaagggccaagcatacgtagcgctcagccgtgcccgatctctccaaggtctgcaaata
gaaggcaccgatgaatacatgcttcagtcgggcttggaactggattccgaagtgaggagg
tttctggaagagcttgagaggagcgctgagggaaattga
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