Colletotrichum lupini: CLUP02_10095
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Entry
CLUP02_10095 CDS
T08561
Name
(RefSeq) uncharacterized protein
KO
K10981
DNA polymerase IV [EC:
2.7.7.7
]
Organism
clup
Colletotrichum lupini
Pathway
clup03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CLUP02_10095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clup03400
]
CLUP02_10095
Enzymes [BR:
clup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLUP02_10095
DNA repair and recombination proteins [BR:
clup03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
CLUP02_10095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_lambd_f
DNA_pol_B_palm
DNA_pol_B_thumb
HHH_8
HHH_5
NTP_transf_2
WSK
TssR_VWA
Motif
Other DBs
NCBI-GeneID:
73344081
NCBI-ProteinID:
XP_049146215
UniProt:
A0A9Q8SW68
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All DBs
Position
5:join(2318298..2319162,2319227..2319406,2319460..2320217)
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AA seq
600 aa
AA seq
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MTDLDFPSIYLLPTHLEADQLHELEGRIPSLTYDISEAEIIVGNIFKRERALFELRRKKV
LTDPVDAAAVADAHLVTPRKRKRASSKSDSDSTVYTEDGQRFGCGTSQFVGTSSAPEEAA
GNTNTVTVVKLAWLQDSFAQNKVLPLHDYVLYMGIKKEEDRAPLTIMGSDILSRAAADNA
SQTQGGLLPQKKKAQSPTGMHRSVPSLIRQTTSENASTLKLPPVPQYLRTTYACQRSTPV
DPPNAAFIDGLKTIRTIRKLGGDQIGVRAYSTSIATISAYPHKIASSQEVARLPGCGAKI
AELWHEWKETGRLPEADEAQANPKFAVIQVFYDIWGVGDATARDFYSRGWRDLDDVVEHG
WASLSRVQQIGVKYYDEFKLKIPRTEVESITDTILAHARSFHPDFQLVIVGGYRRGKQGS
GDVDVVISHPDESVTFNFVDKLVMSLEKTGHITHTLVLSKHNSERGQQPVSWKGNEFRGS
GFDSLDKALVVWQEPGTSGKGPQERPHRRVDIIISPWKTVGCAVLGWSGETTFQRDLRRY
CKQRKSYKFDSSGIRSRLDGSWVDLETSDLGRAPDMLTAERRVFQGLGLDWVPPEDRCTG
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgacagatctcgattttccctcgatctatctccttcccactcacctagaggcggatcag
ctacatgagctcgaaggaagaatcccgagtctgacatacgacattagcgaggccgagatc
attgtcggcaacatcttcaaacgagagagggcactttttgaactcaggcgaaagaaggta
ctgacagatccggtggatgcagcggctgtcgcagatgcgcatctcgtcacgcctaggaag
cgcaagagggcatcttctaaaagtgacagcgactctaccgtgtacacggaagatggacag
aggtttggatgcggcacatcgcagttcgtcggaacatcgtcagctcctgaggaggccgcc
ggcaatacgaacactgtcacagtcgtgaagctggcctggctccaagattcgtttgcgcag
aacaaggtactcccgcttcatgactatgttctctatatgggcattaagaaggaggaagac
cgcgcgcctctcactattatgggaagtgacatattgtcccgcgctgccgccgacaatgcg
tctcaaacacagggcggtcttttaccgcagaagaagaaggcgcaatctcctaccgggatg
caccggtcagtgccttcgttgatcagacagacaacttcggagaacgcctcaacactgaag
ttgccacctgttccccagtatctcagaacgacgtatgcttgccaaagatctacgcccgtt
gatcctccaaatgcagcattcattgatggactcaagacaatcagaaccatacggaaacta
ggaggcgaccaaataggagtgagggcgtactcaacctcgatagctacaatatcggcatat
cctcacaagatagccagttcgcaagaagttgcgaggctacccggctgcggcgctaagatc
gccgagctgtggcatgagtggaaagaaactggtaggcttcccgaggcggatgaagcccag
gcgaaccccaagtttgccgttatacaggtattctacgatatttggggggtcggtgatgct
acggctcgtgatttctacagcagaggatggcgagacttggacgacgttgtcgaacatggc
tgggcaagtctaagtcgcgtgcagcaaattggcgtcaagtactacgacgagttcaagctt
aagatacctcgaactgaagtcgagtccatcactgacacgatcctggctcacgcccgcagt
tttcacccggactttcagcttgtcattgttggcggctaccggcgtggcaagcaaggtagt
ggggacgtcgacgtggtgataagtcacccggatgagtctgtcacttttaactttgtcgac
aaattggtcatgagcctggaaaagactgggcatataacgcacaccctcgtgttgagtaaa
cataatagcgagaggggtcagcagcccgtcagctggaaggggaacgagtttaggggaagc
ggcttcgattcactcgacaaagcactcgtagtttggcaggaaccgggtacgagtggaaaa
gggccgcaagagaggccgcaccggcgggtagacatcatcatcagtccttggaagacggtt
ggatgcgctgtcctgggctggagcggagagacgacttttcaacgagacctgcgccggtat
tgcaagcagcggaagagctacaagtttgacagcagtggaattcgaagccggctcgacggt
agttgggtcgacctagagaccagcgatctcgggcgggccccggacatgttgacagccgag
agaagggttttccagggtctgggcctcgattgggttcctcccgaggacaggtgcaccggc
tga
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