Colletotrichum lupini: CLUP02_10545
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Entry
CLUP02_10545 CDS
T08561
Name
(RefSeq) brix domain-containing protein
KO
K14561
U3 small nucleolar ribonucleoprotein protein IMP4
Organism
clup
Colletotrichum lupini
Pathway
clup03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CLUP02_10545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clup03009
]
CLUP02_10545
Ribosome biogenesis [BR:
clup03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CLUP02_10545
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Brix
Motif
Other DBs
NCBI-GeneID:
73344531
NCBI-ProteinID:
XP_049146666
UniProt:
A0A9Q8SWT5
LinkDB
All DBs
Position
5:complement(join(3883251..3883537,3883610..3883716,3883765..3883932,3883987..3884118,3884180..3884314,3884372..3884556,3884613..3884885))
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AA seq
428 aa
AA seq
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MIRKQARQRRDYLYRKALILKEAETTEKRAQLRSALASGKPIDPEIAKNKALRKDYQYDE
SRPDRTVDEEMDLDDEYSQLSGISEPRLLVTTSRDPSSRLSAFSKEIRLLFPTSVRLNRG
NLILPDIVQSSKSNGLTDIVLLHEHRGVPTAMTISHLPHGPTLSMSLHNVVLRADIPGSI
RGSVSEAFPRLIFEGFKSRLGQRIVKILKHLFPPLDPPTTKAKVGSRVVTFVNNEDSIEV
RHHVFVRTSYDSVELAEVGPRMTMRPFEIRGGTLENKDGDVEWHLTQYTRTGRKKEYLLR
RRCRERSWGKYITISAQKIGSLRGRNAATTNRTCAGQATSMDVRRRESWQRHSWDYTKWK
MKNDVELKISKPERRSFLAAYNGKMVECRKQRHPKLQEKTSQGRQKSIKMLLNNMYYIRL
VAISVAGR
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgatccggaaacaggcccgacaacggcgcgactacctctatcgcaaggcgcttatattg
aaagaggcggagacgaccgagaagcgcgcccagctacgatctgctcttgcttctggcaag
cccatcgaccccgaaatcgcaaagaacaaggcgctgcggaaagactaccaatatgacgag
tcgcgacccgatcgaacagtcgatgaggagatggatctcgacgacgaatactcccagctg
tcgggaatctcggaaccacggcttttggttacaacttcaagagacccgtcctcaaggctt
tcagccttctccaaagagatcagattgctcttccctacatccgttcggctcaatcgtgga
aatttgattcttccggacattgtgcagtctagcaagtccaacgggctcacagacattgtc
ctccttcacgaacatcgcggtgtaccgactgccatgaccatttctcatcttccccacggc
cctacgctatccatgtcgctccacaacgttgtactcagagcagatatacccggaagtatc
agaggatccgtctcagaggctttcccacggttaatatttgagggttttaagagccggctt
ggacagcggatcgtgaagatcctgaaacatcttttccctccgctcgatcccccgaccacc
aaggctaaggtagggtcaagggtagtgacatttgtgaacaatgaagactccattgaagtc
agacatcacgtttttgtccggacttcgtacgattctgtcgagctcgctgaggttggacct
cggatgacgatgcgccccttcgagattcgcggtggaaccttggaaaacaaggatggcgat
gttgagtggcaccttacacagtacactcgtactggtagaaagaaggagtacctgcttagg
cgtcgctgccgtgagagatcatggggcaagtacattacgatcagcgcccagaagatcggc
tcgttgcgtgggcgaaatgccgcaacgacgaacaggacttgcgccggtcaagcgacgtcg
atggacgtgagacgaagagagtcgtggcaaaggcactcatgggactacacgaagtggaag
atgaagaacgatgttgaactaaagatatccaagccagaacgccgtagtttcttggcggct
tacaacggcaagatggtggagtgcagaaaacagagacatcccaagcttcaggagaagaca
agtcaaggcaggcaaaaaagcatcaaaatgttgttgaataatatgtattacatccgattg
gttgcgattagtgtggccggccgttga
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