Colletotrichum lupini: CLUP02_10551
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Entry
CLUP02_10551 CDS
T08561
Name
(RefSeq) Not1 domain-containing protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
clup
Colletotrichum lupini
Pathway
clup03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLUP02_10551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clup03019
]
CLUP02_10551
Messenger RNA biogenesis [BR:
clup03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CLUP02_10551
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CLUP02_10551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF7310
WKF
EAD9
HUN
SNARE
Cep57_MT_bd
Transcrip_reg
Motif
Other DBs
NCBI-GeneID:
73344537
NCBI-ProteinID:
XP_049146672
UniProt:
A0A9Q8WJP0
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All DBs
Position
5:join(3908693..3908947,3909008..3910079,3910152..3910662,3910720..3910780)
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AA seq
632 aa
AA seq
DB search
MAARKLQQEVDKCFKKVAEGVAEFEAIYEKIEQSNNISQKEKLEDNLKREIKKLQRLRDQ
IKTWAASNDIKDKSPLLEHRRLIETQMEKFKAVEKAMKTKAYSKEGLASSAKLDPQEQAK
AEASDFLNSMVDELEQQIETLEAEAESIQATMKKGKSQTAKAERMAEIERIIERHKWHQG
KLELIRRSLENGGVDTDQVTELEETIRYYVSDGMNDDFVEDEEMYEELALDEDEGAFGLA
QDGDKGSSQDAQSIAEEPTPEPEIIKAPPKPKAVAEASASGRRSSSQNKSPLPALATLHM
PTIIGNGAATGPTMKPAVAPARPAEGLKYASAAAAAAASDKIGISPLPPPPGAAPVPAST
PGSQSKTSATSSPATTSAHPVAAKEPEPKQPPPPSTTPSEPPIANASASANASASTSTNT
NTKAVSAPTKAEKRAKKEQAAATSQTNGATNGIQATAEGEEESIYHLPSSLQDLVESFEA
SRKRPAPLNSPSTQRMLQTSQATCPDIMDADVPRTYRPDLRLTSTGVGFPQEPLPLFDDP
RLYSRIDPDTLFYVFYYKQGTPQQYLAAKALKDQSWRFHKQYQTWFQRHEEPKNITEEFE
QGTYRFFDYESTWMNRRKADFKFAYKFLEDDV
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacgcaaactccaacaagaagtcgacaagtgcttcaaaaaggtggcggaaggc
gtcgccgaattcgaggccatttacgaaaagattgagcaatccaacaacatctcccaaaaa
gagaagctcgaggacaacctcaagcgcgaaatcaagaagctccagagactccgcgatcag
atcaagacatgggcagcaagcaacgacatcaaggacaagtctcctttgctggagcatcga
aggttgatcgagacgcaaatggaaaagttcaaggccgtagagaaggctatgaagaccaag
gcatactccaaggaagggttagcctcttcagccaagctcgatccccaagaacaagcaaaa
gccgaggcaagcgacttcctaaatagcatggtcgacgagctcgagcaacaaatcgaaacc
ctagaagccgaggccgaatcgatacaagcgacgatgaagaagggcaagagccaaactgcc
aaggcggaacgaatggccgagatcgagcgcattatcgaacgtcataagtggcatcagggc
aaattagagcttattcggagatctctagagaacggcggagtcgacacggatcaggttact
gaactcgaagagacgattcgatattacgtctcggatggcatgaacgatgactttgtcgag
gacgaggagatgtacgaggagctcgctctggacgaggacgagggcgcatttggcctagct
caagatggcgacaagggctcatcgcaagacgctcagtcaatagcggaggaaccgacaccc
gaaccagaaatcatcaaggctcccccaaagccaaaggcggtagcagaagcatctgcttca
ggacgcaggtcgagctcacagaacaagtccccactgcctgcgttagctaccttgcatatg
ccgacaatcattggcaatggcgcagcaaccggtcctacgatgaagccagcggtagccccc
gcaagacctgctgaaggcctcaaatacgcgtctgcggcggcggcagcggcagcgtcagac
aagatcggcatctctcccttgccccctccgccaggcgcagcacccgtccctgccagtacg
ccgggctcgcaatcgaaaaccagcgctacaagctcacccgcaacgacatcagcgcaccct
gttgcagcaaaggagcccgaacccaagcagccaccaccaccatcaacaaccccaagcgaa
ccaccgatcgcaaatgcgagcgccagcgcaaacgcaagcgcaagcacaagcacaaacacg
aacacaaaggccgtctcggcccctaccaaggcagagaaacgcgcgaaaaaggagcaggct
gcggcaacatctcaaacaaacggtgccacaaatgggatccaggctacggcagagggagag
gaagagtccatatatcaccttccgtcatctttgcaagacctcgtcgagtcttttgaagct
tcccgcaagcgcccagcgcctctcaactcgccatccacgcaacgcatgctccagaccagc
caggctacgtgtcccgacatcatggatgcagatgtacccagaacgtaccgtcccgacttg
cgattgacatcaaccggcgttggctttcctcaagagccactccctttgtttgatgacccg
cggctatattcacggatcgaccctgacacgctcttctacgtgttctactacaagcaaggc
acgccccagcaataccttgccgccaaggcgttgaaggaccagagctggcggttccacaag
caatatcaaacctggttccagcgccatgaagagccaaagaacatcaccgaggaattcgag
cagggcacataccgcttcttcgactacgaaagcacatggatgaaccgaagaaaggcggac
ttcaagttcgcgtacaaattcctcgaggacgatgtatga
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