Colletotrichum lupini: CLUP02_11339
Help
Entry
CLUP02_11339 CDS
T08561
Name
(RefSeq) WD domain-containing protein
KO
K14298
mRNA export factor
Organism
clup
Colletotrichum lupini
Pathway
clup03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CLUP02_11339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clup03019
]
CLUP02_11339
03036 Chromosome and associated proteins [BR:
clup03036
]
CLUP02_11339
Messenger RNA biogenesis [BR:
clup03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CLUP02_11339
Chromosome and associated proteins [BR:
clup03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CLUP02_11339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
WD40_Gbeta
ANAPC4_WD40
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
WD40_like
WD40_MABP1-WDR62_1st
Beta-prop_ACSF4
FliO
Beta-prop_RSE1_2nd
Pep3_Vps18
Motif
Other DBs
NCBI-GeneID:
73345317
NCBI-ProteinID:
XP_049147452
UniProt:
A0A9Q8SZ81
LinkDB
All DBs
Position
5:join(6418717..6418983,6419048..6419499,6419564..6419921)
Genome browser
AA seq
358 aa
AA seq
DB search
MSGLFGAASAASSSNTVGDLKQDVALNNPPEDSISDLAFSPAQNQTSDFLAVSSWDKKVR
IYEIAPNGQSEGRHAYEHDGPVLGCDWSKDGTKVLSGGADKAVKLCDLGSQQTIKIGEHD
QPVKSVRFFESSGTPMAVSGSWDKTVKYWDMRSPTPAASLACQERVYTIDVRNDLLVIGT
ADRYINVVDLKNPTKFYKTLQSPLKWQTRVVSCFADAAGFAIGSIEGRCAIQYVEDKDAT
SNFSFKCHRDPPANNVTNVYAVNDISFHPVHGTFSTAGSDGTFHFWDKDAKHRLKGYPQV
GGSITATTFNKTGSIFAYGISYDWAKGFQHNTQAYPTKVMLHPVQADECKPRPTMKKR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcctctttggcgccgcatcggcggcctcgtcgagcaacacggtcggcgatctc
aagcaggacgtcgctctcaacaacccacccgaagacagcatttccgatctcgccttctct
cccgctcagaaccagaccagcgactttttggcagtctccagttgggacaagaaagtcagg
atatacgagattgcccccaacgggcagagcgaagggcggcacgcctacgaacacgatggc
ccagtcttgggctgcgactggtccaaggacggcacaaaagttctctctggcggcgccgac
aaggccgtcaagctctgcgacctgggctcccagcagacgatcaagattggcgagcacgac
cagccggtcaagtcggtccgcttcttcgagtcgtccggtactccgatggccgtgtcgggc
tcctgggacaagacggtcaagtactgggacatgcgctcgcccacacccgcggcgtcgctg
gcctgccaggaacgcgtatacacgatcgacgtgcgaaacgatctcctcgtcataggaacc
gccgaccggtacatcaacgtggtggacctcaagaacccgacaaagttttacaagaccctg
cagagtcctctcaagtggcagacgagggtcgtcagctgtttcgcggacgctgctggcttt
gccattggtagtatcgagggacgttgcgcgattcagtatgtcgaggacaaggatgctaca
tccaacttctccttcaagtgccaccgagaccctcccgccaacaacgtcaccaacgtctac
gctgtcaatgacatctccttccaccccgttcacggcaccttcagcacggccggctctgac
ggcaccttccacttctgggacaaggatgccaagcaccgtctcaagggctacccccaggtc
ggcggcagcatcacggccaccaccttcaacaagaccggatccatcttcgcgtacggtatc
agttatgactgggctaagggcttccagcacaacacgcaggcgtaccccaccaaggtcatg
ttgcacccggttcaggcggatgagtgcaagcctcgcccgaccatgaagaagcgataa
DBGET
integrated database retrieval system
