Colletotrichum lupini: CLUP02_11494
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Entry
CLUP02_11494 CDS
T08561
Name
(RefSeq) SNF2 family domain-containing protein
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
clup
Colletotrichum lupini
Pathway
clup03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CLUP02_11494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clup03036
]
CLUP02_11494
Chromosome and associated proteins [BR:
clup03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
CLUP02_11494
SWR1 complex
CLUP02_11494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
HSA
Motif
Other DBs
NCBI-GeneID:
73345472
NCBI-ProteinID:
XP_049147607
UniProt:
A0A9Q8SYY4
LinkDB
All DBs
Position
6:complement(join(78659..84018,84236..84346,84433..84490))
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AA seq
1842 aa
AA seq
DB search
MWGTLVESGRLVGWTSPDSSGCLPVPQGSINRPPSPPERPLRPYAPRVLRSEAKYQHHGP
ISRPPPVAIMNKTASPDPAQPTNEAIDSQRDEQTATVPQYDTDPPSSPLESLGSDDFEGQ
LTPNGNDFIGLPLRSPSPASPLSPSTPSPSPPPPVPSSDIDDERPLKRRRVSTPSAPGSG
QKKKQISPPWKKITAEGPTSFIDNGRRKSGRINTIPLEFHPPSGKRMTRGALNSSPPSKN
KYASTNGHAATPTPNGTSKSKTPSRKPSAAKPAPPPPKTSNRKSAANETKSTSRSTRKRS
PSPSAQPTRQSTRTRRGRRSSIDDEVATTSAGSPNRTRIKLRVRATELPVVHPGQVSKRL
RIGPNFEEYWEKAQAIPVEDGGMYIPEEGPSYTDEMAQKDAQIVLRIEEAVEPGGILSQE
RCTLFVPEAEEEPPRQWAHADHMAKAVTNFRKLMVAEQQRHRAQAKKIAEACKDAWLRRQ
PKSAEELEAEARFVWIGRYRVVVKSMFGTWENVRYEINRRRIQEWEAEEQRRVKAALQEA
VNLSEQKLQARRTQADSDISDEDDLDDDDDDDNEDGLDDLDSDLENSQAMSVDADDDDSG
NDDDDVMSSSEEEEAGEDHTGDAGDEKLTMEQLRAKYANLPELPPDEQAEKKLTNGVESE
ADSKVVATSPGEETSDESVDMDDDMGSTDMDDSDDGSAADEESEEEDGDEEPSGLLGMLF
GKSELKKIKDEAPPDDKEPHENATALVADGASPQAEASSNFRDDIVEDDDDDEVSLIQHP
GIFLDGDEMEVDTEGQATVLPSAGDQDEGVEIAASEKELTLPVQSLKSDEALVNGIHKEP
TSTRVVAATNGIPEAVESADTEMQDAPSKTSEASMPPAPSTTATVATKHVTPDTDIITVP
PSREQSHSPPTSDTKPSDVDTMSLATPGAKDVVSRSASPNPNSQQTQIPFLLRGTLREYQ
HHGLDWLAGLYANNTNGILADEMGLGKTIQTISLLAHLACHHEVWGPHLVIVPTSVMLNW
EMEFKKWCPGFKILSYYGTQEERKRKRQGWNNDDVWNVCITSYQLVIQDQQVFKRRRWHY
MILDEAHNIKNFKSQRWQTLLGFNTRARLLLTGTPLQNNLTELWSLLFFLMPAENGVGGF
ADLQEFHDWFHKPESQILENGRETMDEEARAIISKLHKVLRPYLLRRLKADVEKQMPAKY
EHVEFCRLSKRQRELYDGFLARTDTRETLSSGNYLSIINCLMQLRKVCNHPDLFVDRPIM
TSFRMQKSVPAEFQVTDQFLHRSLLAVEPMSIVSLGVLNMIPTQHENMSNTTAERISQLS
LHRVLMELREAQNTRAHLARTNLDPSTVESNIMYLDSLARWRRFEELQHSVYLNALRGQR
RPIYGKRLIDFLTLGLDGRPRKPKPRVPNQILNWFAEDSDFLRAVIHPADERADAMQTII
QKFTCVTPAVITRDMNEVILGRKAAQAFTDEDLKLSAPVRWAPFMPKQPPIDPWHESRMR
HSIQFPDKRLLQYDCGKLQALDKLLRKLQAGGHRALIFTQMTKVLDILEQFLNIHGHKYL
RLDGQTKIEQRQILTDRFNHDPRILCFILSTRSGGLGINLTGADTVIFYDQDWNPAMDKQ
CQDRCHRIGQTRDVHIYRLVSEHTIEANILRKASQKQMLDDVVIQEGSFTTDYFNKLSVR
DVLGTEGTDLVDDAANAAMDRLLGGGDSGASRTVAEDLKQAEDQEDVEAAKAAEKEIQDD
DAEFNEKSGAHSGASSTRQGTPREDVAGQSGGGPGPSGLGRFSESVAPDEAVEIEHNAWG
ERIYNVDEYMLRTMAEQLKGTALDLPKDKKKSKKKGRDTRKR
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atgtggggcactttggtcgaatccggacgtctggttggatggacttcccctgactcctct
ggctgcctgcctgtacctcagggcagcatcaatcgtccgccgtcaccacccgaacggcct
ctacgcccctacgccccccgagtcttgaggtctgaggccaagtaccaacatcacggcccc
atctcgcgtccgccccccgttgctattatgaacaagaccgcgtcgcccgaccctgcgcaa
cccaccaacgaggccatcgactcccaacgcgacgaacaaaccgcgactgtacctcaatat
gataccgatccgccctcatcaccgctcgaatccctcggatccgacgatttcgaaggccaa
ctgacccccaacggtaacgacttcatcggactacccctccgctcaccatcacctgcatca
ccattatctccgtcaacaccctcgccctcgcctccccctcccgtgccctcctccgacatc
gatgatgaacgccctttgaaacgacgtcgcgtctccacgccatccgcccctggatctggt
cagaaaaagaagcaaatctctccgccatggaagaagatcaccgccgagggtccgacgtct
tttatcgacaatggcagacgcaagtctggtcgaatcaacactattccccttgagttccat
ccgccatccggcaagcgaatgacgagaggagctcttaacagcagtccgccctccaagaac
aagtatgcttctaccaacggccatgccgcgacccccaccccaaacggaacctccaagtcc
aagactccctcgcgaaaaccatcagcagcaaagcccgcaccgcctccgcccaagacctcc
aaccgaaagtcggctgcgaacgaaaccaaatccacctcccgatccacacgcaagcgaagc
ccttccccatctgctcaaccaactaggcagtcaacgcggacaaggcggggccgtcgcagc
tccatcgacgatgaggtagcgacaacatcggcggggagcccgaaccgtacgcggattaag
ttacgtgtgcgcgcgaccgagctacccgttgtacatccgggacaagtcagcaagaggcta
agaatcggacccaactttgaagaatactgggaaaaggcgcaggcaatacccgttgaggat
ggtggcatgtacatcccagaggaggggcctagctacactgacgagatggcccagaaggat
gctcaaattgtcttgcgcattgaagaggctgtggagcctggcggtattctttcacaagag
cgctgcaccctgtttgttcccgaggcggaagaggaaccaccacgccaatgggctcatgca
gaccacatggccaaggctgttaccaacttccgcaagctgatggtagcagagcagcagaga
catcgagcgcaggccaagaagattgccgaagcatgcaaggacgcttggctccggcgccaa
ccaaagtcagcagaagaactcgaggccgaggcgcgctttgtgtggatcgggcgatacaga
gtggttgtcaaaagcatgtttggaacctgggagaatgttcggtacgagatcaatcggcgg
aggattcaagaatgggaggcagaggagcagcgccgggtcaaggctgcgcttcaggaggcc
gtcaatttgtcagagcagaagctgcaggcaagaagaacacaggcagattcggacatatcc
gatgaggatgatctcgacgacgatgacgacgacgacaatgaggacggcctggatgacctc
gacagcgacctagagaacagccaagcgatgtcggtagatgcggatgatgatgactccggc
aacgatgacgacgatgtcatgtcatcttcagaagaggaggaagcaggcgaagatcacacc
ggcgatgctggcgatgagaagctcactatggaacagcttcgcgccaaatacgccaatcta
cctgagcttcctcccgacgaacaagccgaaaagaaactcaccaatggcgtcgagtccgag
gcagactcaaaagtcgtggcaacgagccccggagaagagaccagcgatgagtccgttgac
atggatgacgacatggggtccaccgatatggacgacagtgatgacggctctgccgcagat
gaagagtcggaagaggaagacggcgacgaggagccatctggattgttgggcatgctcttt
gggaaatccgagttgaagaaaattaaggatgaggcgccgcccgatgacaaggagccacat
gaaaacgctacagccttggtggctgatggcgcatccccacaagcagaggcatcatcgaac
tttagggacgacattgttgaggatgatgatgatgatgaagtgtctctcattcaacacccc
ggtatcttcttggacggtgacgagatggaggttgacacagaaggacaagctactgtgcta
ccaagcgctggcgaccaggatgaaggtgtcgaaattgcagcctcagagaaggagctcacc
ttgcccgtacagtcgctcaagtcagatgaggccttagtcaatggcatacataaggagcca
acatccacgagggtagtagctgccaccaacgggataccagaggcagtggaatctgctgat
acggaaatgcaagatgcgccatcgaaaacatcagaggcgtcaatgcccccggcgccatct
accactgctacggtcgcaaccaaacatgtcactcctgataccgatatcattactgtcccg
ccaagtcgagaacaaagtcattcgccccctacatccgacacaaagccttcagatgtggac
acaatgtctttggcaaccccaggggcaaaggatgttgtcagtcggtcagcttcaccaaac
cccaattcacaacagacgcaaatcccgtttttgcttcgtggtactctgcgtgaatatcag
catcatggactggactggctggcgggactgtatgccaacaacaccaatggcattcttgca
gatgagatgggtcttggcaaaaccatccagaccatctcgctactcgctcatcttgcttgc
catcacgaggtttggggaccgcatctggtgatcgtaccgacaagtgtcatgctcaactgg
gagatggagttcaagaaatggtgtcctggtttcaaaattctttcctactacggcactcaa
gaggagaggaaacgcaagcgacagggatggaacaacgatgacgtatggaacgtctgcatt
acatcctaccagcttgtcatccaggaccagcaggtcttcaaacgtcggaggtggcactac
atgattctcgacgaggcccacaacatcaagaacttcaaatcacagcggtggcagacgctc
ctcggtttcaatactcgggcaaggcttctacttacaggcaccccgctccaaaacaatctc
accgagttgtggtcgttgctgttcttcctcatgccagccgaaaatggcgtgggtggattc
gcagacttgcaagagtttcacgattggttccacaagccagagtctcaaatcctggaaaac
ggccgcgagacgatggacgaggaagcgcgagcgatcatttccaaattacacaaggtcttg
cgaccgtatctactacgaagactcaaggccgacgtcgaaaagcaaatgccggccaagtac
gaacacgtagagttctgtcgcctgtcgaaacgtcagcgcgagttgtatgatggcttcttg
gctcgcacagacacccgggagacgctgtcctctggcaactacctttccatcatcaattgt
ctgatgcagttgcgaaaagtctgcaaccatcccgaccttttcgtggaccgccccatcatg
acgtcctttaggatgcagaaatccgttccagcagaatttcaggttaccgatcagttccta
caccgatccttacttgcagtagagcctatgtccattgttagcctgggcgttctcaacatg
attcctacacaacacgagaatatgtccaacacaacggcggagcgtatttcgcagctcagc
ctccacagggtactgatggaactgagagaggcacagaataccagagctcatctggctcgt
acaaacctcgacccttcaacagttgagtcgaacattatgtatctggacagcctggctcgc
tggcgccgcttcgaggaattgcagcacagcgtgtacctgaacgctctccgcggccaacgt
cggcccatctatggcaagcgcctgattgatttcctgacgctcgggttagacggcagaccc
cggaaacccaagccaagagttcctaatcagatcttgaattggtttgcggaggattctgac
ttcctccgtgccgtcatccatccagctgacgaacgagccgatgcgatgcagacgatcatt
caaaagttcacatgcgtcactcccgccgtcatcactcgcgacatgaacgaggtgatactg
ggaagaaaggcggctcaggcctttacggacgaggatctcaagctctcagcgcctgtccgg
tgggctcctttcatgcccaagcagccacccattgacccatggcacgagtctcgcatgcgt
cacagcatccagttcccagacaagcgtctgcttcaatatgactgtggaaagcttcaagcc
ttggacaaacttcttcgcaagcttcaagccggcggccatcgtgccttgatcttcacacag
atgaccaaggttctggatattctcgagcagttcctcaatatccacggccacaagtacctt
cgacttgatggacaaacaaagattgagcagcggcaaatccttacggacaggttcaaccat
gacccacgcatcttgtgcttcatcttgtctacacgttctggtggattgggcatcaacctt
actggggccgataccgtcatcttctacgaccaagactggaacccagccatggacaagcag
tgccaggatcgatgccatcgtatcggtcagacacgagatgttcacatctaccgactcgtc
agcgagcacacaattgaagccaacattcttcgtaaagcgtcgcagaagcagatgctggac
gacgtggtcattcaggagggtagtttcaccacggactacttcaacaaactttccgtgcgg
gacgttctcggcactgagggaacagacctggtcgatgatgccgctaatgccgccatggac
cgccttctgggtggaggagacagtggagcgtcgagaaccgtggccgaggaccttaagcag
gccgaagaccaggaagacgtagaagccgccaaggccgccgagaaggagattcaggacgac
gacgcagagttcaacgaaaagagcggcgcacattctggcgcctctagcacccgccaaggc
acgccgcgggaggatgtcgccggtcagtcaggcggcggcccgggaccctctgggctaggc
cggttctcagagtctgtcgcaccggatgaagcggtagagattgaacataacgcgtggggc
gagagaatatataatgtggacgagtacatgctccggacgatggcggagcagctcaagggc
acggcgctagacctgcctaaggacaagaagaagagtaaaaagaagggtcgcgacacacgg
aagcggtaa
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integrated database retrieval system
