Colletotrichum lupini: CLUP02_11616
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Entry
CLUP02_11616 CDS
T08561
Name
(RefSeq) MutS domain V
KO
K08740
DNA mismatch repair protein MSH4
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clup03036
]
CLUP02_11616
Chromosome and associated proteins [BR:
clup03036
]
Eukaryotic type
Meiosis-specific proteins
Others
CLUP02_11616
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
73345593
NCBI-ProteinID:
XP_049147728
UniProt:
A0A9Q8SYX3
LinkDB
All DBs
Position
6:join(472800..473519,473573..473894,473945..473985,474039..474308,474360..474447,474503..474903,474951..475419,475493..476016)
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AA seq
944 aa
AA seq
DB search
MDARYLRPPRPSTGYMTTPSQTPAPYGRASPYFPQTTSRTGTSSANPREEGSYTATPIPS
SAEDPVSSSYYTPSYDYGTDTSGIISRPRTTRPSTSHTSRTSRTPFLPNSAKHTIVCALS
EARGITPAVGIVFFNVDTGEAILSQISDNRFFVRTLHKLQIMEPTHLLIVSSCCPPNPKS
RLYSHIEEHMPDTKITSLDRKYWSEMDGLNRIQTFAFREDAEAVKVAIEGSFYATCSFAA
AMSFLETEFSVRVVPHSLRIRYQPSEDTMMIDVSAIMSLEILQNRRHAASSDSLYGVLKH
TMTPMGGRVLRSNLLQPSTLKESYLEPRFAALEELLANQDMFAEVRTALKAFPDVESMLT
KLVIIPNKPSVEASERAINHVLMVKTFIDAVPPVFQALGPATCPLLTKIRDLCQPELTAA
ARELVYQNIHEDVHYVKSALDLRNQRTFAVKPGINGLLDVARQAYKENTDDVHKHVEELN
REHSIEAILRFDNGRKYSLRMRAVDFEDRAIPAVLVNRTMRGRYIECLTMHLKKLNQRIT
DSVAEVVMLSDKVIQDLIDSIRTQLQPLYRVCDSIALLDMIASFAQASSTFDWRRPEISD
TLALKAARHPIMDKTLKGGFVPNDYYATEEHRFQIVTGCNMSGKSTYIKSISLLQIMAQI
GCFVPAEYASFPIVHNIFARVTTNDNIESNMSSFSLEMREMAFILRYVVLTQEVPVLTCP
SNVTHKSIVIIDELGRATSTRDGLAIAIAIAEALIQSRAIVWFATHFTELADVLADRPGV
LNLRLVTQVSTTDNNVPKLTMMYKVESGKTEELLYGITLAKAMAFPKRFLEVAEEVAISL
HQRREQNKQSSQARKMLNRRKLILNLHEQLKQVKSSAMDDSSMRSYLIRLREEFVLRMEA
IENGGNQSSSNASEALGDGMDGEDKEFEDEDVFDTVDAESLWSS
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcgatacttgcggccgccgagaccttcgacgggttacatgaccactccttct
cagacaccagcgccatacgggagggcgtctccttacttcccccaaacaacctcaagaacg
ggcacaagctcagcaaatccgagagaagaaggctcctacacggcaacgccgataccatct
tcagcggaagatcctgtgtctagttcttactacaccccaagctacgactacggtactgat
actagtggtattatatcgagacctcgtacgacccggccgagcacttcccacactagtcgc
acgtcgcgaaccccttttctgcccaacagcgccaaacacaccattgtgtgtgccctgagc
gaggctcgcggaatcactcctgctgttggaattgtattcttcaacgttgataccggagaa
gctatcctcagccaaatctccgacaacaggttcttcgttcgcactctccacaaacttcag
atcatggagccaacccatctcctgatcgtcagctcgtgctgccccccgaatcccaagtcg
aggctttacagccatatcgaggaacatatgccagatacaaagatcacatctcttgataga
aagtactggtcagagatggatgggctcaatcgtattcaaaccttcgcattccgagaagac
gccgaagctgtaaaagttgctatcgaaggcagcttttatgcgacttgctcatttgccgcg
gctatgagtttcttggagaccgagttctccgtgcgtgttgttccacactctcttcgcatt
cgttaccagccctcggaggatacaatgatgattgacgtatctgccatcatgtctctcgag
atcctgcaaaatcgacgccacgcggcgtctagcgacagcctttacggtgttctcaagcat
acaatgacgcccatgggcggccgggtacttcgaagtaatctattgcagccgtctacacta
aaagagtcataccttgagccaagatttgctgcattggaggaacttcttgcaaatcaagac
atgtttgcagaggtccgaacagctttgaaggcttttcctgatgtcgagagcatgctgacc
aagcttgtcatcatccctaacaaaccgtccgttgaggcgtcagaaagagcaatcaatcat
gttctgatggtcaagaccttcatagatgccgttccaccagtgttccaggcgctaggccct
gccacgtgccctcttctcaccaaaatcagagatctctgccagccagagttgactgcagcc
gccagagagcttgtgtaccagaatattcatgaggatgttcattatgtcaaaagcgctcta
gacctacgaaatcaaagaacttttgcggtcaaacctggaatcaacgggcttctcgatgtt
gccagacaagcctataaggaaaacaccgatgacgtccataaacatgttgaagagctgaat
cgcgagcatagtatcgaagctatcctacggtttgataacgggcgcaagtacagcctccga
atgcgagcagtggatttcgaggaccgggctattcctgcggtgcttgtcaaccggacgatg
aggggtcgttacatcgaatgtctcacaatgcatctcaagaaactgaaccagagaatcacc
gactccgttgcggaagtggtcatgctgagtgacaaggttattcaggacctcatcgacagc
atccggactcaactgcagcccctctaccgcgtctgcgattcaatcgcactgctcgacatg
attgcgtcatttgcacaggcaagttcgaccttcgattggagaagaccggaaatatcagat
actctagcgctgaaagctgctaggcatcccatcatggacaagactctgaagggtggcttt
gtaccgaatgattattacgctaccgaggagcaccgtttccagattgtgaccggctgcaat
atgagcgggaaaagcacttacatcaagagtatctctctgcttcagatcatggcacaaatt
ggctgcttcgtgcctgctgaatacgccagttttcccattgtacacaatatcttcgctcgg
gtgactaccaacgacaatattgagtccaatatgtcaagcttctcgcttgagatgagagag
atggctttcatccttaggtacgtagtgttgacgcaggaggttccagtactgacgtgccca
agcaatgtcacccacaagagcatcgtcatcatagatgaactaggtcgagccacaagcact
cgagatggacttgctattgcgatcgccatagccgaagcccttatacagagccgtgccatt
gtgtggtttgcaactcacttcacagagcttgccgacgtcctagccgatcgtcccggagtg
ctgaatcttcgtctcgtcacgcaggtttcgacgacggacaataacgtacccaagttaact
atgatgtacaaggttgagtcgggaaagactgaggagttgctctatggcatcacacttgcg
aaggcaatggcatttcccaaacggttcctggaagttgccgaggaagttgctatatcactg
catcaacgaagggaacagaataagcagtcttctcaagcgaggaagatgctcaaccgacgc
aagctgatacttaatcttcacgaacagctcaaacaggtgaaaagttcagcaatggatgat
tcatcgatgagaagctacttgatacgtctccgagaggagttcgtcttgcgtatggaggcc
atcgagaacggcggcaatcaaagcagtagcaacgctagtgaggctctcggagacgggatg
gacggggaggataaggagttcgaggacgaagacgtcttcgacactgttgatgccgagtca
ctttggagcagctga
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