Colletotrichum lupini: CLUP02_11759
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Entry
CLUP02_11759 CDS
T08561
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
clup
Colletotrichum lupini
Pathway
clup00040
Pentose and glucuronate interconversions
clup01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CLUP02_11759
Enzymes [BR:
clup01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CLUP02_11759
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
73345736
NCBI-ProteinID:
XP_049147871
UniProt:
A0A9Q8WK25
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All DBs
Position
6:join(936003..936154,936208..936386,936445..936551,936617..936735,936786..936962,937042..937309)
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AA seq
333 aa
AA seq
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MKITSALATLFALAAATPTPTVDYTAEKAHLVKRASISDKATLGYATLNGGTSGGSGGTV
TTVSTLAEFTAAVNEKDTAARIVVVKGTISGTANVRIGSNKSVIGASAGAGFNGIGLHVR
RMSNVIIRNIKSTNVLASTGDGVKIEESINVWIDHCEFSSALVSDKDYYDGLVDASHAAD
YMTISYTYFHDHWKTSLVGHSENNGAEDSGHLRITYANNYWANFGSRGPSLRFGTGHVYN
SYYLNGNSGINTRQNAQVLIQSNVFKNVTVPITSQDSDIVGYAVAIDNDLGGASNLAPVG
TMNANSPPYSYSLLGSANVVATVPGQAGQKLTF
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacctccgccttggctacgctgttcgcccttgcggctgcgactccgacccct
accgtcgattacactgcggagaaggcccacctcgtgaagcgagcctccatctcagacaag
gcgactctcggttatgccactctgaacggcggaacttcaggaggatccggtggcacggtc
actaccgtctctaccctggccgagttcactgccgctgtcaacgagaaagataccgccgca
aggatcgtggttgtcaagggcaccatcagcggcactgccaacgttcgcatcggcagcaac
aagtccgtcattggcgcatctgctggtgcaggattcaacggcattggactgcacgtccgc
cgcatgtccaacgtaattatccgcaacatcaagtctaccaacgtgcttgcctcaactggt
gatggcgtgaagattgaggaaagcatcaatgtttggatcgaccactgcgagttctcttcg
gcccttgtatctgacaaggactactatgacggtctcgtggatgcttcccacgctgccgac
tacatgaccatttcctacacatacttccacgaccactggaagacttctttggtcggacac
agcgagaacaacggtgcagaggacagcggccacctgcgcatcacctacgccaacaactac
tgggctaacttcggctctcgcggcccgtctctgcgcttcggtactggccacgtctacaac
tcctactacctcaacggtaattctggaatcaatacacgccaaaatgcccaggtcttgatt
cagagcaacgtcttcaagaacgtcactgttcccatcacctctcaggactccgacatcgtt
ggatacgctgttgccattgacaacgatcttggtggtgcttccaacctggcccccgtcggt
accatgaacgccaactctcccccttactcctacagcctgctcggttccgccaatgtcgtt
gctaccgtccctggacaggctggccagaagcttaccttctaa
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