Colletotrichum lupini: CLUP02_12465
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Entry
CLUP02_12465 CDS
T08561
Name
(RefSeq) DNA repair protein rhp51
KO
K04482
DNA repair protein RAD51
Organism
clup
Colletotrichum lupini
Pathway
clup03440
Homologous recombination
clup03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CLUP02_12465
03460 Fanconi anemia pathway
CLUP02_12465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clup04131
]
CLUP02_12465
04121 Ubiquitin system [BR:
clup04121
]
CLUP02_12465
03400 DNA repair and recombination proteins [BR:
clup03400
]
CLUP02_12465
Membrane trafficking [BR:
clup04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
CLUP02_12465
Ubiquitin system [BR:
clup04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
CLUP02_12465
DNA repair and recombination proteins [BR:
clup03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
CLUP02_12465
RecA family proteins
CLUP02_12465
FA (Fanconi anemia) pathway
Other FA pathway factors
CLUP02_12465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
AAA_25
RecA
HHH_5
ATPase
DnaB_C
AAA_22
AF1548-like_C
Motif
Other DBs
NCBI-GeneID:
73346439
NCBI-ProteinID:
XP_049148574
UniProt:
A0A9Q8WKH4
LinkDB
All DBs
Position
6:complement(join(3209865..3210676,3210732..3210879,3210936..>3211127))
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AA seq
383 aa
AA seq
DB search
PNSFPDVRFCACTAVISLVYTQFDVSFLTSTSTMADADGYDESHNGDESGMTGPGAPTPL
TALEGVAGLTKRDIQMVVDGGFNTVESVAYTPRRMLEQIKGISEQKATKILAEASKLVPM
GFTTATEMHQRRSELISITTGSKQLDTLLAGGIETGSVTELFGEFRTGKSQICHTLAVTC
QLPFDMGGGEGKCLYIDTEGTFRPVRLLAVANRFGLSGEEVLDNVAYARAYNSDHQLQLL
QQAGAMMCETRFSLLIVDSATALYRTDFLGRGELSSRQTHLAKFMRTLQRLADEFGIAVV
ITNQVVAQVDGGPSAMFNPDPKKPIGGNIIAHASTTRISLRKGRGETRVAKIYDSPCLPE
SDCLFAINEDGIGDPSPKDLEKE
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
cctaactcgtttcctgacgtccgattttgcgcgtgcactgctgtcatttccctcgtgtat
acacagttcgacgtctcatttctcacatctacgagcacaatggctgacgctgacggctac
gacgagagccacaatggcgatgagagcggcatgaccgggcctggcgcgcctacgccactc
actgcgctcgagggagttgccggcttgacgaagcgcgatatccaaatggtcgtcgacggc
ggcttcaacaccgtagagtcagtagcgtataccccgcgccgcatgttggagcagatcaaa
ggcatctcggaacaaaaggcaaccaagattcttgccgaagcctcgaaacttgtgccaatg
ggcttcacgaccgccacggagatgcaccaacgacgaagcgagctcatctctatcacgact
ggctccaagcagctggatacacttctcgccggtggtatcgagaccggatcggtgactgag
ctgtttggagagttccgcacgggaaagagtcagatttgccacactcttgccgtgacatgt
caactgccctttgacatgggtggcggagagggcaagtgtctgtacattgatactgagggt
acctttcgacctgttcgattgctggccgtcgccaacagattcggtctctccggagaagag
gtcctcgacaatgtggcctatgctcgcgcgtacaattcagatcaccagctccagctcctc
cagcaggctggtgccatgatgtgcgagacccgattctcgctcctcattgtggacagtgcg
acggctctttacagaaccgatttcttgggccgaggtgaactctcgtcgagacagactcac
ctggccaaattcatgcgcacgcttcagcgtctcgccgacgagtttggtattgccgtggtg
atcaccaaccaagtcgtcgcacaggtcgatggtggaccgagtgccatgtttaaccccgac
ccgaagaagccaatcggtggtaacattatcgcccacgcaagtacgacgagaatcagcttg
agaaagggtcgaggcgagactcgtgtcgccaagatctacgacagcccctgtttgccggag
agtgactgtctctttgcgatcaatgaggatggcatcggtgacccaagccccaaggacctg
gagaaggaatag
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