Colletotrichum lupini: CLUP02_12488
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Entry
CLUP02_12488 CDS
T08561
Name
(RefSeq) CPL domain-containing protein
KO
K14844
pumilio homology domain family member 6
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clup03019
]
CLUP02_12488
03009 Ribosome biogenesis [BR:
clup03009
]
CLUP02_12488
Messenger RNA biogenesis [BR:
clup03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
CLUP02_12488
Ribosome biogenesis [BR:
clup03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
CLUP02_12488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF_NOP9
Motif
Other DBs
NCBI-GeneID:
73346462
NCBI-ProteinID:
XP_049148597
UniProt:
A0A9Q8T0K3
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All DBs
Position
6:join(3272345..3272621,3272695..3274529)
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AA seq
703 aa
AA seq
DB search
MASTGVKRKSAPAAGKGAADGKFNKKAKVESKKKAQPVETPEEDDEGSFEDDSEDSDDGG
VQLTPRDRAQQAQAKDKKDGANGADKNKNFERGQNSRESHAIQKKLALERKMAKPLADEL
ARTKKIWERLRRKSHVPSEERKQLVDELFTIITGRVKEFVLKHDATRAVQTALKYATATQ
RKQITRELQGTYTQLAESRYAKFLIAKMVVQADGEIKDLIIPEFYGKVRKLINHPEASWI
LDDIYRQIATKEQKAILLREWYGPEFALLERSKDEKPTSDLATILEQNPSKKAYILKSLN
DMINSLVQKKMTGFTMLHDAMLQYFLNVEPGTENFNLFVEMIKDDEEGDLLKNMAFTRSG
SRLVALLLAHGSSKDRRNLLKAYKDNFVLMSGDPNAHIVILTAFDVIDDTKMSSKAIFPE
LIGDDKEKATDNIVVSTSNPFAKATLLYLLEGQTRALFSDNMSDDLAILKEVHAIRQTTS
KKDAEIRRKELVAVMSPALITAVVEAAPALVADPFGCQLVADVLLSAEGDKTAALEAVAA
VAEGDPGAEPMEVEGVPTPVHVSRTAFGGRLIKTLIAGGKFNKETGKVEPVEPPLKFADI
LYPIIKDYIVDWATGPSSFVVLNMLEAEDFSHAAELKKTLKKHKKDLQKAATEETAEQKE
AKEARAQKDSEKGEKGAKKGKKGAKKADKPVGNLGSKLLLEKL
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaccggtgtcaagagaaagagtgcccctgccgctggtaagggtgctgccgac
ggcaaattcaacaagaaggccaaggtcgagtcgaagaagaaggcccaacccgtcgagacc
cccgaggaagacgatgagggaagtttcgaggatgactctgaggactcggacgacggcggt
gtccagctcacccctcgcgatcgtgcccagcaggctcaggccaaggacaagaaggatggc
gccaatggcgccgacaagaacaagaactttgagagaggtcaaaactcgagagagtcccat
gccatccaaaagaagctcgccctggagcgcaagatggccaagcccctcgccgacgaactc
gctcgaaccaagaagatctgggagaggttgaggaggaagtcccacgttccgtccgaggag
cggaagcagctagtcgatgagctcttcaccatcatcaccggccgcgtcaaggaattcgtc
ctcaagcatgacgccacacgcgctgttcagaccgcccttaagtacgccacggctacccaa
cggaaacaaattacccgcgagctgcagggcacctacacccagcttgccgagagccggtat
gccaagttcctcatcgccaagatggtggtgcaggccgacggcgagatcaaggatctcatc
atccccgagttttacggtaaggtgcggaagttgatcaaccaccccgaggcttcatggatc
ttggacgacatctacagacaaatcgcgacgaaggagcagaaggccatccttctgagagaa
tggtacggacccgagtttgccctcctcgagcgcagcaaggacgagaagccgacttccgac
ctcgcgactatcctcgagcagaaccccagcaaaaaagcctacatcctcaagagtctcaac
gacatgatcaactcgctggttcagaagaagatgactggtttcacgatgcttcacgacgcc
atgttgcagtacttcctcaatgtcgagcccggcacggaaaacttcaacctgtttgttgag
atgatcaaggacgacgaggagggtgatttgctgaagaacatggccttcacccgctctgga
tcccgtttggtggctctgcttctggcccacggttcctccaaggaccgcagaaacttgctc
aaggcatacaaagacaacttcgtgctgatgtcgggtgaccccaacgctcacattgtgatc
ctcaccgctttcgatgtcattgatgacacgaagatgtcatcaaaggccatcttccccgag
ctgattggcgacgacaaggagaaggcgacagacaacatcgttgtttctacatcaaatccc
ttcgccaaggccacgcttctgtatctgttggagggccagacccgcgctctcttctccgat
aacatgagcgacgaccttgcgattctcaaggaggttcatgcaattcgccaaaccaccagt
aagaaggacgccgagataagaaggaaagagttggttgctgttatgtcacctgcgctcatt
actgccgttgtcgaggctgcaccggctttggtcgcagaccccttcggttgccagctggtt
gcggacgtgctgctctctgcggagggtgacaagacggcagctcttgaggccgtagcagcg
gtcgctgagggcgaccctggcgcggagcccatggaggtagaaggtgtccctacccctgtc
cacgtctcgcggacagcatttggaggccggttgatcaagacgcttattgcaggaggcaag
ttcaacaaggagaccggcaaggtcgagcccgttgagccgccattgaagttcgccgatatc
ctgtacccgatcatcaaggactatattgtggactgggccacgggcccaagttcctttgtc
gttctcaacatgttggaagccgaggactttagccatgctgctgagctgaagaagacgctc
aagaagcacaagaaagacctgcagaaggctgccactgaagagacggccgagcagaaggag
gccaaggaggccagagcccaaaaggatagcgagaagggcgagaagggcgcaaagaagggc
aaaaagggtgcaaagaaggcagacaagcctgtaggcaaccttggcagcaagcttctgttg
gagaagttgtaa
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integrated database retrieval system
