Colletotrichum lupini: CLUP02_12517
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Entry
CLUP02_12517 CDS
T08561
Name
(RefSeq) Prp31 C terminal domain-containing protein
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
clup
Colletotrichum lupini
Pathway
clup03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CLUP02_12517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clup03041
]
CLUP02_12517
Spliceosome [BR:
clup03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
CLUP02_12517
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
73346491
NCBI-ProteinID:
XP_049148626
UniProt:
A0A9Q8T124
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Position
6:join(3341491..3341817,3341917..3343416)
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AA seq
608 aa
AA seq
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MATLADELLNDFEDSGSEAEETQQDNDPLGLDHAPEASGRKASGSMDLDDDQSEPEDQDE
EMGGTPKGAVDPVEDAEDTKAKVEKMQLGGVNDVRSVASLMSSLEPVLEKIAHYQSQPTP
TELLGNIEDHPEYHLLTQSNSLSTLIDSEIVLVHKYIRDHYSIRFPELETLITNPLEYAK
VVAILGNGPLDSENIKKLQHSTENVLQASLKSVLDGPSLMIVTVEATTTKGGDMSQEELE
RVYRACEMVISLDKAKKTLTGYVQSRMNLFAPNLTAMIGSLTAAQLLNAAGGLTGLSKTP
ACNIAAWGSKKGAGAAGLATNIGVRQQGFLYHSPIIQGIPNDLKRQAMRIVSAKLLLAAR
VDRIHSSADGSTGEDLKEQCLTRLEKLTEPPPNKGPRALPVPDDKPSRKRGGRRARKAKE
ATAMTELRKAQNRMAFGKEEREVGYGTGETTVGMGMIGQGNDGRIRNLQVDQRTRAKLGQ
KNKGWGGATPMGGAASSLRGFGQSANSNIDLRGKGLRTSGVGTSLGAGAGTASSLAFTPV
QGLELVDPKVQAELSRKRKAEEDRWFKGGTFTQVAGSSNDGFKKPDLPPSKRVDTGAGKM
GPPPPRSG
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcgactctagcagatgagctgctgaacgatttcgaggactctggctcggaagcagag
gagactcagcaagacaatgatcccctaggacttgatcatgcgcccgaggcgagcggtcgc
aaagcatcgggcagcatggatctggacgatgaccagagcgaacctgaggatcaagatgaa
gaaatgggtgggacacccaagggtgctgttgatcctgtcgaagatgcagaggatacaaag
gcaaaggtcgagaagatgcagctgggtggcgtcaacgatgttcgcagtgtcgccagtctc
atgtcaagtttggagccagtactagagaaaatcgcacactaccagtcgcaaccgaccccc
acagaactgctaggcaacatcgaagaccatcccgaataccacctcctgacacaatcgaac
agtctgtcgactctcatagacagcgagatcgtcttggtacacaagtatatcagggaccac
tactcaatacgattcccagaactggagacgctcatcaccaacccactggagtatgcgaag
gtcgtcgcgatcttgggcaatggaccgcttgattcggagaatatcaagaagcttcagcac
tcaacggaaaatgtccttcaagcttccctgaagtccgttcttgacggcccatccctcatg
atcgtaacagtggaggctacgacaacgaagggcggagacatgtcgcaagaagaactggaa
cgcgtatacagagcctgtgaaatggtcatttccctcgacaaggcgaagaagaccctaacg
ggctatgtccagtcgcgcatgaatctgttcgcgccgaatttgactgctatgatcggttct
ctgacggctgctcaactgttgaacgccgctggtggacttactggtctgtcgaagacgcca
gcgtgcaacattgcagcgtggggttcaaagaaaggtgctggtgccgcgggcttggctacg
aatattggcgtcagacagcagggtttcctctaccattcacccatcattcaaggcattccc
aacgatctcaagagacaggccatgcgcatcgtatcagcgaagctgctactcgctgcccgc
gtcgacagaattcactccagcgccgatggctcgacgggcgaggatctgaaagagcagtgc
ctcacaagactcgagaagctcacggaaccgcctccaaacaagggccccagagctttgccg
gtaccagatgacaagccttcccgcaagcgtggtggtagaagggcaaggaaggctaaggag
gctacggccatgacggaattgcgcaaagcccagaatagaatggcctttggcaaggaggag
cgtgaggtcggctacggcacaggggagaccacggtcggcatgggtatgatcggacagggt
aacgacggcagaattcgcaacctccaagtcgatcaacgcacgagggccaagctcggccag
aagaacaagggctggggcggcgcaacgcccatgggaggagcggcatcctcgctcaggggt
tttggacaatcagcaaactccaacattgacctacgcggcaagggcctgaggacgtcaggt
gttggcacatcgctgggcgcgggagcgggcacggcatcctcgctggccttcacgcctgta
cagggtctggagctcgtcgaccccaaggtccaggctgaactcagtcgcaagcgaaaggcg
gaggaggaccggtggttcaagggtggcactttcacccaggttgcgggctcgtccaatgat
ggcttcaaaaagccagacttgcctcccagtaagagggttgataccggcgccggcaagatg
ggacctccacctccgaggagcggctga
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