Colletotrichum lupini: CLUP02_12744
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Entry
CLUP02_12744 CDS
T08561
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
clup
Colletotrichum lupini
Pathway
clup03010
Ribosome
clup04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CLUP02_12744
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
CLUP02_12744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
clup03011
]
CLUP02_12744
04121 Ubiquitin system [BR:
clup04121
]
CLUP02_12744
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clup04147
]
CLUP02_12744
Ribosome [BR:
clup03011
]
Ribosomal proteins
Eukaryotes
Small subunit
CLUP02_12744
Archaea
CLUP02_12744
Ubiquitin system [BR:
clup04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
CLUP02_12744
Exosome [BR:
clup04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CLUP02_12744
Exosomal proteins of colorectal cancer cells
CLUP02_12744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Plexin_RBD
Dsc3_N
TBK1_ULD
Ubiquitin_5
DUF2604
Sde2_N_Ubi
OTU1_UBXL
Cytochrome_C7
Motif
Other DBs
NCBI-GeneID:
73346716
NCBI-ProteinID:
XP_049148852
LinkDB
All DBs
Position
6:complement(join(4215015..4215104,4215158..4215535))
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AA seq
155 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMAKKRKKKVYTTPKKIKHKRKKTKLAVLKYYKVDSDGKIERLRR
ECPSDTCGAGVFMAAMNDRQYCGRCHLTYVFDKKE
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtcaagaccctgacgggcaagactatcacccttgaggtggagtcgtcc
gacaccatcgacaatgtcaagtccaagatccaggacaaggagggcatcccccccgaccag
cagcgcctgatcttcgccggaaagcagctcgaggacggccgcaccctctccgactacaac
atccagaaggagtccaccctccaccttgtcctgcgcctgcgtggtggtatggccaagaag
cgcaagaagaaggtctacaccacccccaagaagatcaagcacaagcgcaagaagaccaag
ttggctgtcctcaagtactacaaggttgactctgacggcaagatcgagcgccttcgccgc
gagtgcccctccgacacctgcggtgccggtgttttcatggccgccatgaacgaccgccag
tactgcggccgctgccacctcacctacgtcttcgacaagaaggagtaa
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