Colletotrichum lupini: CLUP02_12838
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Entry
CLUP02_12838 CDS
T08561
Name
(RefSeq) WD domain-containing protein
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
clup
Colletotrichum lupini
Pathway
clup04138
Autophagy - yeast
clup04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
CLUP02_12838
04148 Efferocytosis
CLUP02_12838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clup04131
]
CLUP02_12838
Membrane trafficking [BR:
clup04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
CLUP02_12838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Clathrin
DUF7730
DUF2457
BUD22
zf-RING_Vps41
Vps39_1
zf-RING_5
TPR_PEP5_VPS11
2EXR
NBP1
WD40_like
zf-RING_UBOX
zf_RING_Vps8
Tom6
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
73346808
NCBI-ProteinID:
XP_049148944
LinkDB
All DBs
Position
6:join(4589402..4589451,4589535..4589714,4589780..4589851,4589908..4590520,4590571..4591598,4591652..4593389,4593470..4594289,4594355..4594394,4594488..4594498,4594554..4594765,4594830..4594888,4594980..4595433,4595671..4595727)
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AA seq
1777 aa
AA seq
DB search
MQFLKGAGWPSQPQQPVRVPAAQERESKLPAPQVSDIGPTGRLNPLYFGLTGGGGAPLQR
GLHDWWTAYQRPTQIPSSSQGTLPVGAAAQVPVEAPIVALRAAKLPLNLNRPRRTPKELV
EPDPKLRVAPFLASDPSIAAFLYARPSHCLIIPAQARRLSGTPSTKRQCQCEPPVDGTSS
TMTDASDPDRDGPTAAQKGKEPETAETVTAPEELAATKSEKELKKDHDGTDNKEKEEEDE
EDDDEDDEDDEDDDEEDDDDDDEDDDDEDDDEEPRLKYARLTQHLGPIYRNGDATSAFLV
AGDKMIIGTHNGNIHVIQLPMFQSLRVYHAHSASITSISISPNPPPLPTARSEAVQRLAQ
EAAESVAKQRPPSRQSGSSPAAASRRPKDPSPVSNTPSNNVHIATSSMDGNVCVFSLVDT
KDVQLRNFARPVQAVSLSPDYKNDRTYLSGGLAGQLILTTGGQPGRSTSTTVGTAAATAS
GWLGSMGLGTNTGKDTILHSGEGTINNIKWSLSGKYVVWLNEHGVKIMRSKLHLESADAD
DAWKRIGHVDRPQTDEWETMASVWKGRVEWIDEQAVETEDGEAGRKDVGSTLAPESSTQQ
GTSSTKKIERLLVGWGGTIWIIHVHPGSVGTGKRAGEKSIGRAEIAKHLRMDCIISGISL
YTQNLLLVLAYVLPDDDEDDDDEKAGKGHKSKLSTTSASSEPSGGIRRRQNNLPPELRLI
DLSSQAEVDKDGLSVSRYERLSSGDYHLGVLPAQNAASAVASSKGALEAITGFGSDMWNA
AINPRTLFSSGASIRSGHSGDGVSSTQLPSSVSGARRSGTPTVHPNLIKPGVKIFIHSPF
DFILGTKRDLGDHLGWLLEHQDYQKAWELLDEHPEIMSAPPENLHELVPTTPDRKQSSQE
DFDDASSVMGSTGLARQPNSSAQREKRRIGELWIRELIEAGSWAEAGKVCSRVLGSPDRW
EKWVWTFAGADKFDEITDYIPSEPMYPPIPGTIYEVVLNHYIQADKLRFRELLDRWPTDL
FDIKTVTTALDNQLKYRDVREDSVEGGEKGRDWKIVMESLARLHEANGRFRESLKCHIKL
QDADSAFRLIRDNHLAEAVTDDIPGFIGLRVPNKKLGTMGPDELEAATSEAITLLVDEAQ
HGLVKPSVVVSQLEEKELNLYLFFYLRGLYKGEGIEEHSGETRDRLLMDSQSQVNEFADM
AVQLFAKYDRDLLMSFLKSSTSYKFEKAVQECEKYRYDDELVHLYSKTGEMKRALYLIID
RLKDVKKAIDFAKQQDDPDLWDDLLNYSMDKPSFIRGLLEEVGTAINPIKLVRRIPEGLE
IEGLREGLKHIMKEHEIQYSISSGVARVLRSEVAAAQNDLRSGQRKGIKFEVVVQSTDHV
DVKVRDVVHPPVSAEEVEESFFKAPKAVEQPGHTHQPPKPGHCAQCHESFTEYEMETLVG
FACGHVFHQSHLMEMLYPGKRQEADFGLASEESIRSGYRVGSKVTHARLLKDRVREGCPV
SAQPSFDLRALLILITPEREDNLDANSNINVQMVGHYVASIGALQEARAGRQVTSLSPNP
PTRHQVPHAHVSTWMARTTCHSFNLGLEGKRYGVLGYLPEPGSREAELWELNRTQSPFLR
LPPEIRNKIYRLLLSNMGIHVLHDPKTGSFHCLTLRPGANPWTSVPATTSSPTRQIVEPE
RGDTTTKTGTKKNRSSRQQAAVLGRGLTLLVLVCRQLYHETELIPYRENAWSWATPGLME
RYLLTERRMGFAQRRVLREAEGLAIEEGIVLYGIYET
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttctgaaaggggcgggttggccatcacagcctcagcagccggttcgcgtcccg
gcagcccaagaacgcgaatcaaagcttccagcaccacaagtcagcgacataggtccaacg
ggcaggctcaatccactatattttgggttgacgggtgggggaggggcaccactacagagg
ggcctacacgattggtggacagcttaccagagacccactcagatacctagttcttcccag
ggtaccttaccggtaggtgctgctgcgcaggtgcctgtggaagctcccatcgtagctctt
cgagcagctaagcttcctctaaacctcaacagaccgcgacgcacccccaaggagctcgtc
gaacccgatccgaagctcagggtagctccgttccttgcctcggatccctccattgcagcc
tttctctacgccaggccgagccattgcctcatcatccccgcccaggcccgccgactttct
ggtactccatcgaccaaacgacaatgccaatgcgagcctccagttgacggtacatccagc
acaatgacggacgcttccgatcccgatcgcgatggtcccaccgctgcacagaaaggcaaa
gagcctgagacggccgagactgtgactgcgccggaggaattggccgcgaccaagtccgag
aaagaattgaagaaggaccatgatggcacggacaacaaggagaaggaagaggaggatgag
gaagacgatgatgaggacgacgaggacgatgaagatgacgatgaagaagacgacgacgac
gacgatgaagatgacgacgatgaagacgatgacgaggagccccggctgaagtatgccagg
ctcactcaacacctggggcccatttaccgcaatggtgatgccaccagcgcgttcctcgtc
gcgggtgataagatgatcataggaacgcataacggcaacatccatgtcatccaattgccc
atgttccaatctctccgcgtgtatcatgcccattccgcttccatcaccagcatctccatc
tccccaaacccaccccccttgccgacagcaaggtcagaagcagtgcaaagacttgctcaa
gaagctgctgaaagcgtcgcaaaacaacgaccgccttctcgtcagtcgggcagttcccct
gccgccgcctcgagaaggcctaaggatccttctcccgtctccaacacaccctctaataac
gtccacatcgctacatcgtccatggacggcaacgtctgcgtcttttctctcgtagataca
aaggatgttcagttgcggaactttgcgcgtcctgtgcaagccgtctcactctcccccgat
tacaagaatgaccggacatacctttcgggtggtctcgctgggcaacttatcctaacgacc
ggaggccagccgggccgtagcacctcgacgaccgtcggaacggcggctgccaccgcttct
ggctggcttggtagcatgggcttgggtaccaacacaggcaaggacacgatcctgcactct
ggcgaaggcacaatcaataatatcaagtggtcactctccggaaagtacgtagtgtggctg
aacgagcatggcgtgaagattatgcggtcaaagttgcatctggagagtgccgacgcggac
gacgcctggaaacgcattggccacgtagatcgtcctcaaacagatgagtgggagaccatg
gcaagcgtctggaaaggacgcgtcgaatggatcgacgagcaagctgtcgagaccgaagac
ggggaggctgggcgcaaagacgttggctcaacgctggcacccgaaagctcaacgcaacaa
ggaacctcaagtaccaagaagatcgagagactactggttggctggggaggcacaatctgg
atcatccacgtccaccccggcagtgttggtactggtaagcgagctggtgaaaagtcgatt
ggacgtgccgaaatcgccaaacaccttcgtatggattgcatcatttctggaatttcgtta
tatacccaaaatcttctccttgtactagcatatgtattaccggacgacgacgaagacgat
gatgatgagaaggccggcaagggtcacaaatcgaaactatcaacaacgtcagcgagtagc
gagccatctggcggaatacgacgccgacagaacaatttaccgccggaactccgattaatc
gacctgagctcgcaagccgaagtcgataaagatggccttagtgtaagcagatatgagagg
ctgtcatcgggcgactaccatctcggcgttctccctgcacagaacgcagcctcggccgtg
gcctcatccaagggagccctggaagcaatcactggatttggctcagatatgtggaatgcc
gccatcaatcccaggacactatttagctctggtgcaagtatcaggagtggacacagcgga
gacggcgtctctagcacgcagctcccgagctcagttagtggcgcccggagatcaggaact
cctacagtccatcccaacctcatcaagccaggagtaaagatcttcattcacagcccattc
gatttcattctcggaacgaagagagaccttggcgaccacttgggctggctgctggagcac
caagactatcagaaagcatgggaattgcttgacgagcaccccgagatcatgtctgcgcct
ccagagaaccttcatgagctcgttccaacaacgccagacagaaagcaaagcagccaagag
gactttgacgatgcctcatccgtcatggggtctacagggctagcaagacagcctaattcc
tcggcgcagagggagaagagacgcattggcgagctttggattcgggagctgattgaggca
ggtagctgggctgaagccggtaaagtgtgtagcagagtccttggctctcccgacagatgg
gaaaaatgggtctggacatttgctggcgccgacaagttcgacgagatcacggactacatt
ccttctgagccgatgtacccgccgatcccaggcacaatctacgaagtcgtcttgaatcac
tacattcaggcagacaagctgagattcagagaactgctagaccgctggccgactgatctc
tttgacatcaagaccgtcacgacagccttggataaccagctcaagtaccgcgatgtacga
gaggacagcgtcgaggggggtgagaagggtcgcgactggaagattgtgatggagtcattg
gcacgcttacacgaggcaaatggacgcttcagggaatcgctcaaatgccacatcaagcta
caagatgcggactctgcgttccgcttgatccgcgacaaccatctcgccgaagcagtgact
gacgacattcccggcttcatcggattgcgagtgccgaacaaaaaactcggaaccatgggg
ccagacgagcttgaagccgctacctcggaggccatcactctcctcgttgacgaagcacag
catggtcttgtcaagccttctgtggttgtatcgcagcttgaggagaaggaactcaaccta
tatctcttcttctacctgcgcggtttgtacaagggcgagggaatagaggagcattccggg
gagactcgcgacaggctgctgatggacagccaatcccaagttaacgaatttgcggacatg
gctgttcaactgttcgccaagtacgatcgggaccttttgatgagctttctaaagtcctcg
acctcctacaaattcgagaaggctgtccaagagtgtgaaaagtacagatacgacgacgag
ttggtacatttgtactccaaaacgggcgagatgaaacgagcgctctatctcatcattgat
cgattgaaggatgtcaagaaggcaatcgattttgcaaagcaacaagacgaccctgatctc
tgggatgatttgttgaactacagcatggacaagcccagcttcatccgcggccttctcgaa
gaagtcggaacggccatcaatcccattaagctcgtgaggcgcattcctgaaggactcgaa
atcgaaggcttgcgagagggcctaaaacacatcatgaaggaacacgagattcaatacagt
atcagctcgggtgttgcgcgggtactccgaagtgaggtcgccgccgcacaaaatgacctg
cgaagtgggcagcggaagggaatcaagtttgaagtcgtcgttcaatcaacggatcatgtc
gacgtcaaggtcagagacgtcgtgcatccgccagtcagtgcggaggaagtggaagagagc
ttcttcaaagcaccaaaggcggtggaacagcctggccacacgcatcagccgccgaagcct
ggccactgcgctcagtgccacgagtccttcacagagtacgagatggaaaccttggttgga
tttgcttgcgggcacgtcttccaccagtcacatctcatggaaatgctttaccccggcaag
agacaagaggccgactttgggctggctagcgaggagtcgatccgaagcgggtatcgcgtt
ggctcaaaggttacgcatgcgcggttgctcaaggaccgagtgcgggagggttgtcctgtc
tcggcacagccatcttttgatcttcgggccttgctcattctcattacacccgaacgtgaa
gataatctggatgcgaatagcaacattaatgttcagatggttggtcactacgttgcgtcg
attggcgcactccaagaagcacgggccgggcggcaggtcacctcactctcccccaacccc
cccacacggcaccaggtaccccacgcccacgtttccacctggatggcgcgaacgacatgt
cactccttcaacctcggcctggaggggaaacgatatggcgttttgggatacctaccggag
ccgggctcaagggaggctgagctatgggagctgaaccgaacgcaatctcctttcctgcgc
ctcccgccagaaatacgcaacaagatctaccgtctcctcctatccaacatgggcatccac
gtcctccacgaccctaaaacgggatccttccactgcctcacgctccgacccggcgcgaac
ccctggacctccgtccccgcgactacttcatcccccacgaggcagatagtagaaccagaa
agaggagataccaccaccaagaccggcaccaagaagaacaggtcttcacgacagcaggcc
gcggtcctgggacgggggctgacactgctggtgctggtctgtagacagctctaccacgag
acggagctgattccataccgcgagaacgcgtggagctgggctacgccggggttgatggag
cggtatctgcttacggagcggcggatggggttcgcgcagaggagggtgctgagggaggca
gagggtctggctatagaggagggcattgtactctatggcatctacgagacatga
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integrated database retrieval system
