Colletotrichum lupini: CLUP02_13138
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Entry
CLUP02_13138 CDS
T08561
Name
(RefSeq) Ras family protein
KO
K07880
Ras-related protein Rab-4B
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clup04131
]
CLUP02_13138
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clup04147
]
CLUP02_13138
04031 GTP-binding proteins [BR:
clup04031
]
CLUP02_13138
Membrane trafficking [BR:
clup04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
CLUP02_13138
Exosome [BR:
clup04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
CLUP02_13138
GTP-binding proteins [BR:
clup04031
]
Small (monomeric) G-proteins
Rab Family
Rab2/4/14 [OT]
CLUP02_13138
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
AAA_33
GTP_EFTU
RsgA_GTPase
PduV-EutP
AAA_22
SRPRB
ABC_tran
Gtr1_RagA
AAA_16
NACHT
AAA_28
AAA_7
Motif
Other DBs
NCBI-GeneID:
73347092
NCBI-ProteinID:
XP_049149228
UniProt:
A0A9Q8WM16
LinkDB
All DBs
Position
7:complement(join(342618..343361,343428..343557,343644..343708,343789..343851))
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AA seq
333 aa
AA seq
DB search
MTRPRGSSAASEESNGTAGEQELGSMYDYLAKIILLGPSGTGKSCLLHRFVKNEWRVLSS
QTIGVEFASKIIKVGTGSRRKRIKLQLWDTAGTERFRSVSRSYYRGAAGAILVYDVTNHS
SFRGLQPFLNDARALASPNLSCLLVGNKLDLASDQLIDTSLPPPTPSSVGSMSYFANGSV
GSTGTSLPSLGTQQKATEAPEGREVSNADANRWAGTVGIPVVMESSAFNGENVDEIFARL
ARMILTKIELGDIDPDDPMSGIQYGDGYGGGWNAGASDGASIKSSMTGATLDEAGGVRRR
RGRRNTRSGANWGLRDWEEVFTLSNRRRGGNCC
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgacgagaccgcggggttccagcgccgcgagcgaggagagcaacggcaccgccggcgaa
caggagctgggtagcatgtacgactacttggcaaagattatcttgctaggaccaagcggg
acgggcaagtcctgtctgcttcaccgcttcgtcaagaacgagtggagagtcctgtcgtca
cagaccatcggcgtcgagtttgcaagcaagatcatcaaagtcggcaccggatcacggcgg
aaacggataaagcttcagctttgggatacggccggcaccgaaagattccgctccgtttcg
cgatcatattaccgaggcgccgccggggctattctcgtctacgatgtcacaaatcacagc
agtttccgcggtctgcagcccttcctcaatgacgcacgcgcactagcatccccgaatcta
tcatgcctattagtaggcaacaagctcgacctcgcttccgaccaacttatcgacacaagc
cttcctccgccaacaccgagcagcgtcggctccatgtcgtactttgcaaacggctccgtc
ggatcaacgggaacaagtctgccatcgctcggcacgcagcagaaggccacggaggcgccg
gaagggcgggaagtcagcaatgcggacgcaaacagatgggcagggacggtcgggatcccg
gtggtgatggaatcgagcgcgtttaacggcgaaaatgttgacgaaatctttgcgaggctc
gcaagaatgatccttaccaagatcgagctgggcgatattgatccggacgacccgatgagt
ggcattcaatacggcgatggatacggaggtggatggaatgcgggagccagcgacggcgcg
agtatcaagagctccatgactggcgcgacactcgatgaagcgggaggtgtccgcagaaga
agaggccgacgaaacacgcgcagcggcgcaaactgggggctgagagattgggaagaggtc
tttacgttgtcgaaccgacgaagagggggcaactgctgctga
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