Colletotrichum lupini: CLUP02_13198
Help
Entry
CLUP02_13198 CDS
T08561
Name
(RefSeq) DNA photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clup03400
]
CLUP02_13198
Enzymes [BR:
clup01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CLUP02_13198
DNA repair and recombination proteins [BR:
clup03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CLUP02_13198
Prokaryotic type
CLUP02_13198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
73347151
NCBI-ProteinID:
XP_049149287
UniProt:
A0A9Q8T1V1
LinkDB
All DBs
Position
7:complement(join(523294..523843,523912..525421,525505..525589))
Genome browser
AA seq
714 aa
AA seq
DB search
MHVQISRFQEHDDAQDIAPIVNLSPAGSFQIQSFDWKHPSFRHLMLACRVLLPSNALPPL
THSYTRVAIATTAISPFASRFNSTSALSFSQLCNSRLLCSTRQPSSINLTAANPHSHPRY
FTTMPPKQKRKAAPAAESSDSGRKRTKTEQNGGDPLRKPHPFHEDAEKHGIVLRKFYPHE
MSNDRARAYNDNELPRPIEELTSALEQTSKTRKAVKTKNAVVHWFKMDLRTTDNRSLSLA
SAKAKEAGVPLIAMFIVSPQDYEAHLTAPIRIDFMLRTLHVLREDLAKLDIPLYVETVEK
RKKIPERIAELMDQWEASHLFANMEYEVDELRREGKMVRMFADKGLSYEVLHDTCVVPPG
LLTSGAGKQYAVYSPWFRAWVRHVHENLDLLELYDPPAKNPSSAREKYGKLFETEIPEEI
VDRKLDDDQKKRYRAFFPAGEHEARSRLEKFCEEKVGQYHNKRNIPHDAGTSTLSVHLAS
GTISSRTCVRYARDRNKTKKLDAGNEGIRVWISEVAWRDFYKHVLVNWPYVCMNKPFKPE
YANIEWSYDMDDFKAWKEGRTGFPIVDAAMRQMVHMGWMHNRCRMIVACFLAKDLLIDWR
MGERVFMETLIDGDFASNNGGWGFSASVGVDPQPYFRIFNPLLQSEKFDADGDYIRKWVP
ELKGIKGKAIHAPYDRGAGAQAKKAGYPEPMVEHKGCRERALSAYKAGLGRTDL
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtccagatctcccgatttcaggaacatgatgacgcacaagacatcgcgccgatc
gtgaacctttctccagctggatcatttcagattcagtctttcgactggaaacaccccagc
tttcgtcaccttatgctcgcctgtcgcgtcttgctccccagcaacgcgcttccacctcta
actcattcttatactcgtgttgcgattgctactactgccatttctccctttgcctcgcgc
tttaactcgacttccgccttgagcttttctcaactctgcaactcccgcctcctctgcagt
actcgacaaccgagctcgatcaacctcacagcagcgaatcctcactctcatcctcgctac
ttcaccacgatgccgcccaagcagaagcgcaaggcggcgccggcggcggagtccagcgac
tccgggagaaagagaaccaagacggagcagaatggcggagatcccctgcgcaagccgcac
ccgttccacgaagacgctgagaagcatggaatcgtcctccggaagttctatccacacgag
atgagcaacgaccgagcacgcgcctacaacgacaacgaacttcccagaccaatcgaggag
ctcacctccgctctggagcagacttccaaaacgagaaaggcagtcaagacaaagaacgcc
gtcgtccattggttcaagatggatctccggacaacagacaacagatcgctgtccctagcg
agcgctaaggccaaggaagcgggcgttccactgatcgccatgttcattgtcagcccccag
gactatgaagcgcatctaacggcccccatccgcatcgattttatgctcaggaccctgcat
gttctgagggaggacctcgccaaacttgacatcccgctttatgtcgagaccgttgaaaaa
cgcaaaaagattcccgaacggatcgctgagctcatggatcaatgggaggccagccacttg
tttgccaatatggagtacgaggtggacgagctccgccgagaggggaagatggtccgcatg
tttgccgacaagggcctctcgtacgaggtcctgcacgatacgtgcgtcgtccctcccgga
cttttgaccagcggggcaggcaaacagtacgccgtttattcaccctggttccgggcctgg
gtccggcacgtccacgagaacttggaccttctcgagctatacgatccgcccgcgaagaac
ccatccagcgcaagggagaagtacggcaagctatttgaaacggagattccggaggagatt
gtagaccggaagctcgacgacgaccagaagaagcgctaccgtgccttcttcccggctggc
gaacatgaggcacgaagccgtctggagaagttctgcgaggaaaaggtcggccagtatcac
aacaaacgcaacatccctcacgacgccgggacctccaccttgtcagtgcaccttgccagt
gggaccatcagttcgaggacatgcgtgcggtacgctcgggaccgcaacaagaccaagaag
ctggatgcgggcaacgaggggatacgggtatggatcagcgaggtggcatggcgagacttc
tacaagcacgtcttggtaaattggccatatgtctgcatgaacaagcctttcaagcccgag
tacgcaaacatcgaatggtcctacgatatggacgacttcaaagcctggaaagagggcagg
accggattccccattgtcgacgcggcgatgcgccagatggtccacatgggctggatgcat
aaccgatgtcgcatgatcgtcgcctgcttcctcgcaaaggatctccttattgactggcgc
atgggagaacgagtgtttatggaaacccttattgatggcgatttcgcctcaaacaatggc
ggctggggtttctctgccagtgtcggcgtagatccccagccctactttcgcattttcaat
ccactcctccagagcgagaagtttgatgctgacggagactatatccgcaagtgggtgcct
gagttgaagggcatcaagggcaaggcgatccacgctccgtacgaccgcggtgcgggcgcc
caggcgaagaaagcaggctatcccgagcccatggttgaacacaaggggtgtcgtgaacga
gccttatcggcgtacaaggctggattgggcagaaccgacttgtga
DBGET
integrated database retrieval system
