Colletotrichum lupini: CLUP02_13518
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Entry
CLUP02_13518 CDS
T08561
Name
(RefSeq) uncharacterized protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
clup
Colletotrichum lupini
Pathway
clup03440
Homologous recombination
clup03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CLUP02_13518
03450 Non-homologous end-joining
CLUP02_13518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clup03032
]
CLUP02_13518
03400 DNA repair and recombination proteins [BR:
clup03400
]
CLUP02_13518
DNA replication proteins [BR:
clup03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
CLUP02_13518
DNA repair and recombination proteins [BR:
clup03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
CLUP02_13518
BRCA1-C complex
CLUP02_13518
NHEJ (non-homologous end-joining)
MRX complex
CLUP02_13518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_21
SbcC_Walker_B
AAA_15
Filament
AAA_29
KxDL
AAA_16
AAA_22
AAA_13
ABC_tran
Motif
Other DBs
NCBI-GeneID:
73347466
NCBI-ProteinID:
XP_049149602
LinkDB
All DBs
Position
7:join(1713321..1713524,1713578..1717297)
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AA seq
1307 aa
AA seq
DB search
MSKIDKLSIQGIRSFGGSRETISFYTPLTLIVGYNGSGKTTIIECLKYATTGEQPPNSKG
GAFVHDPKLCGEKEVLAQVKLAFTSTSSHKCVATRSLQLTVKKTTRSLKTLEGSLVYNNH
GERTVISSRVAQMDEFIPRELGVSRAILDYVIFCHQDESLWPMSEPSALKKQFDQIFEAM
RYTKAIDNLKVLRKKQGEELAKLKIFEEQDRINKEKGDRAEKRSMALQNDIESSRDKCNA
LTEEMEELQEQIREKHEQANSYLSIVNDLKFKRDQLSYREGSIADIKMTLEELPETDEYL
ENALAQYEERMSRYQEESEQNKAQYSELQMDLTQSRREHSAKLAEQGKHQSDKDKYERQL
QSRMHLVRDAAELHGFRGYDGDLKDSQIKAFNERIQKLLAEKKRDLERLQKENARELDEA
TKVITELEGRKATTTQNRVFAKQRMGAIEKRTNVLQMDINRLDIDEGAKAVLDSQFEDVE
GRLKKAQESLSSADYDTQLKSENEKLWQLESETEKLGRELIECTRLASERAQLDLRKKEL
ADRKRKLETLATTWKPKLDTHIGTTWQTDTLEAQFHDAVKRQNKVVSEARQKRDTARDKQ
QKVDFRLKSAKDVGSKKIDEAQRCRTAVVGALQAVRDGATIEDYEEEVKMHEEDVETYTT
DISLLDALADYYRGCQKTLQDKNKCRLCDRNFDDKSNVSKSRFSDKLIKFLDPNKKEKAE
EDLANSNALLGSLRKVKTQYETYQRLMSELPPLKEEVASFEAECETLGRQLEEHDAAVST
EEGKLNDIESLNKTVINITQVLKDIKDSEAQVDRIMSQQSSGNVSRSADEIHDLQASCNE
QIRTIKGKISKTTTDWQRMRDQVNSLELEKSELRNKLSKALNQLERKKDFLNQIQTLKED
QAHQRDLINTADQELESIEPEIAEARSVRDETLQRGRGKEQSVAEERDKVADSVTEFKMV
ESDIQEYIDRGGPSNLAANQRAIASLEKSIAGLEKEISDLTVRTNKLKQDIDNGDRKKQN
ISNNLKYRQNLQQLDILRRDIAELESRDADEDYKSLISEAKHLENRHNRLVADRGSIMGQ
MKTKDEELERLLEEWQQEYKNSSRKYRESHIKVETTKAAIEDLARYISALDTAIMRYHSL
KMEEINRIAGELWQSTYQGTDIDTILIRSDNENATTGRRSYNYRVCMVKQDTEMDMRGRC
SAGQKVLASIIIRLALAESFGVNCGLIALDEPTTNLDKDNIKSLAESLHAIIKARQAQSN
FQLIVITHDEEFLRHMRCSDFCDSFFRVRRDDKQNSVITKESITRVL
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaattgacaagctatccatccagggcattcgctcttttggtggcagcagggag
acaatttccttctacactcccttgacactcatcgtcggttacaacggctcgggtaagacg
accattatcgagtgtctcaagtatgcgaccaccggcgagcaacctccgaacagcaaaggc
ggtgctttcgtccatgaccccaagctctgcggagagaaggaagtcttggcccaagtcaag
cttgcgttcacatcaactagcagccacaaatgcgttgcgacacgaagccttcagttaacc
gtcaagaaaaccactcgatcgctcaagactctcgagggatcactagtgtacaacaaccat
ggcgaacgtaccgtcatttcatcccgggtcgcccagatggatgaattcatcccgagagaa
ttgggcgtttccagagcaatcctcgactacgtcatcttctgccatcaggacgaatctctc
tggcccatgagtgagccttcggccctgaagaagcagttcgaccagatcttcgaagcgatg
cgatacaccaaagccattgacaacctcaaggttctcagaaagaagcagggcgaagaactt
gccaagctcaagatctttgaggaacaagaccgaatcaataaggagaagggcgaccgtgcc
gagaagcgatctatggcattgcagaacgatatcgagagctccagggacaagtgcaatgcc
ctcacagaggagatggaggagcttcaggagcagatccgcgagaagcacgagcaggccaac
agctatttgagcatcgtcaatgacctcaagttcaagagagatcagctcagctaccgcgaa
ggatccatcgcggatatcaagatgacccttgaagagcttcccgagaccgacgaatacctg
gagaatgcacttgcgcagtacgaagagcgcatgtctcggtaccaagaagaatcagagcag
aacaaggcccagtattcggagctgcaaatggatcttacacagtctcgtcgagaacattca
gcgaagctcgccgagcagggaaaacaccaatctgacaaagacaagtatgaacggcaactt
cagtcccgtatgcacttggtccgagatgcagcagaacttcacggcttccgcggctacgat
ggtgatttgaaggacagtcagatcaaggcgttcaacgagcgcatccagaagctactagct
gagaagaagcgtgatctcgaacgtctacaaaaggagaacgcgcgtgagctagacgaggcg
accaaggtcattacggagctggagggccggaaggcaaccacgacgcaaaaccgtgtgttc
gccaagcaacgaatgggtgccattgagaagcggaccaatgtcttgcaaatggacattaat
cgtctggacattgacgagggcgccaaggccgttttagacagccaattcgaggatgtcgaa
ggcaggttgaagaaagctcaggagtccttgagtagtgccgactacgatactcagctcaag
tcggaaaacgagaagctgtggcaactcgagagcgagacggaaaaacttggacgcgaatta
attgagtgcaccagacttgcctcggagcgggcacagctggatttgagaaagaaagagctg
gcagatcgcaagcgaaaactggagaccctagccaccacatggaagcccaagttagacacg
catattggcaccacttggcagaccgacactctcgaggcccagttccacgatgccgtgaag
cgccagaacaaggttgtttctgaagctcgccagaaacgggatactgcgcgagacaagcaa
cagaaggtcgacttcagactcaagagcgccaaagacgttggttccaaaaaaatcgatgaa
gcacaacgttgtcggactgcggtcgttggtgctttgcaggcggttcgagacggtgcaaca
attgaggattacgaagaagaggtcaagatgcatgaggaagacgtggagacgtacaccact
gatatcagccttcttgatgctttggcggattactaccgcggttgtcaaaagaccctgcaa
gacaagaacaaatgccggctgtgcgaccgcaactttgatgacaaatccaacgtttccaag
tctcgcttctcagacaagttgatcaagtttcttgatcccaacaagaaggaaaaggcagag
gaagatctcgccaactctaacgccctactcggctcactgcggaaggtgaagacgcagtac
gaaacgtaccagaggctgatgtcggagctgcctcctctcaaggaagaggttgcttctttc
gaagcggagtgtgaaactctgggccggcagctcgaggagcacgacgccgctgtcagcacc
gaggaaggtaaactgaacgacatagagtctctcaacaagactgtcatcaacatcacacaa
gttttgaaggacattaaagactccgaagcgcaggttgacagaatcatgtctcagcaatca
tctggcaacgtcagcaggagcgctgatgaaatacatgaccttcaggcttcatgcaacgaa
cagattcgcacgataaagggtaagatctcaaagacgacgacggattggcagcggatgagg
gaccaggtgaattctctcgagctggagaagagcgagctccggaataagttaagcaaggcc
ttgaaccagcttgaacgtaaaaaggacttcctgaaccagatccagactttaaaggaggat
caggcccaccaacgagacttgatcaacaccgccgaccaggagctagaatctatcgagccg
gagatcgccgaggccagatcagtccgggacgaaaccttgcaacgcggccgtggcaaggaa
cagtctgttgcggaggagcgcgacaaggttgccgactccgtcactgagttcaagatggtt
gagagtgatattcaggagtacattgaccggggcggcccttccaacctggcagcaaaccag
cgcgctatcgctagcctcgagaagtcgattgctggcctggagaaggaaatttcagactta
accgtgcggacgaacaagttgaagcaggacattgataacggtgatcgcaagaagcaaaat
atcagcaataacctgaagtaccgccagaacctgcagcagctcgacatcctccgccgagac
attgcagaactggagtctcgtgacgctgacgaagattacaagtcgctgatttccgaagca
aagcacctggagaaccgccacaatcgactggtcgccgaccgtggctctatcatggggcag
atgaagacaaaagacgaggaacttgagcgactcctggaagagtggcaacaagagtacaag
aactcttccagaaagtatcgtgagtcgcacatcaaggttgagacaaccaaagctgccatt
gaggacttggcccgttacatttcggcgctggacacggctatcatgcggtaccacagcctc
aagatggaggagatcaaccgcatcgccggcgagttgtggcagagcacgtaccagggtacc
gatattgacaccatcctcatccgttccgacaacgagaatgcgacgacgggccgccgctcg
tacaactatcgcgtctgcatggtcaagcaggacaccgagatggacatgcgcggccgctgt
tcagcgggtcaaaaggtcctcgccagcatcatcatccgcctcgccctcgccgagagcttc
ggcgtcaactgcggcctcatcgccctcgacgagccgacgaccaatctcgacaaggacaac
atcaagagcctagccgagagcctgcacgccatcatcaaggcgcgtcaggcgcagagcaac
ttccagctcatcgtcatcacgcacgacgaggagtttttgcgacacatgcgctgcagcgac
ttctgcgacagcttcttccgggttcggcgggacgacaagcagaacagtgtcattacgaag
gagagtattaccagggtcttgtga
DBGET
integrated database retrieval system
