Colletotrichum lupini: CLUP02_13530
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Entry
CLUP02_13530 CDS
T08561
Name
(RefSeq) DEAD/DEAH box helicase
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clup03009
]
CLUP02_13530
Enzymes [BR:
clup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CLUP02_13530
Ribosome biogenesis [BR:
clup03009
]
Eukaryotic type
90S particles
Helicases
CLUP02_13530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SbcC_Walker_B
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
73347478
NCBI-ProteinID:
XP_049149614
UniProt:
A0A9Q8T329
LinkDB
All DBs
Position
7:complement(1738111..1740189)
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AA seq
692 aa
AA seq
DB search
MDILKVLSRCIKQPAKGAKNANKGAANLPSAGNRTNPQLFHDEVSSARGNKRKRGKEEVE
EKEEEQLPEVDFFAPPKSETPKESENAKQPAAKAKKADKASSVKATLLPEDECRQILRSH
RLKLTLLSERHKKASKVTKSKKKKVAVEVEKETNQLHPQPLTSFRELRTNYNIAPLLADN
LTHQGFKVPTEVQLGALPLLLKPELALKEVPNNEELGDVSKGVDFLAVAPTGSGKTISFL
IPAINSIMHKRESSEDKDKHDLSAIIIAPTRELVFQIVNEGRKLALNSGIKIAGMKKGMR
FAVAEEDKAESEDEDEDSETEQVKSKSVVKADILVTTPALFYNFLTASSKKDRKVPTVTS
LILDEADVLLDPLFREQTMAIWSACPNPELRTTFWSATFGSNIETLVTEAQLARPASKPL
IRLVVGLKDTAVPNVTHKLIYTATEKGKLLGLRQLLHPTAGDDSGPPLRPPFLVFTQTIE
RATALEEELKYDIPLAAGGPTRIAALHSGLADKARANIMRRFRAGEIWILITTDVLARGV
DFAGVNGVVNYDVPGSSAAYVHRAGRTGRAGREGGVAVTFYTTDDIPFVKTVANVIAASE
RQAGKKGEEANVQKWLLDALPNVSKEDKKKIREKGVEARRSHGAAMISSKSKWERRKDAN
REGATAANKIRIKNARRVGDDEAGAEWGGIDD
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggatatcctcaaagtgttgtcgcgctgcataaaacagcctgccaagggtgccaagaac
gcgaacaaaggagcggccaacctgccatccgccggcaaccgaacgaacccccaacttttc
cacgacgaggtgtcttcagcgcggggcaataagaggaagcgaggcaaagaagaggtcgaa
gagaaggaagaggaacaactgcccgaggtcgatttcttcgcgccccccaagtccgaaacc
cccaaagaatccgaaaatgccaaacagcccgctgcgaaagccaaaaaggccgacaaggcg
tcttctgtaaaggcgactctgctccccgaggacgagtgccgacagatccttcgctcccac
cgactgaagcttacgctcctctccgagcgccacaagaaggcctccaaggtcaccaagagc
aagaagaagaaggtcgctgtcgaggttgagaaggagacgaaccagctgcacccgcagccc
ttaacctctttccgcgagcttcggacgaactacaacattgcgccgctgctggcggacaac
ctcacgcatcaaggattcaaggtgccgaccgaggtgcagctgggcgccttgcctctgctg
ctgaagccagaactggcactgaaagaagtgccgaataatgaggagcttggagatgtctca
aagggtgtggatttccttgccgttgcgccgacaggcagtggaaagacgatcagcttcctg
atccccgcgatcaactccatcatgcataagagagagtccagcgaggacaaggataagcat
gatctgtctgcgatcatcattgcgccgacaagggagctagttttccagattgtgaacgag
ggacgcaagctggccttgaactctggcatcaagatcgccggcatgaagaagggcatgcgc
tttgcagttgcggaagaagataaggccgagagcgaggatgaggacgaggacagcgagacc
gagcaggtcaagtcaaagtctgtcgtaaaggctgacatcctcgtcacaacacccgcacta
ttctacaacttccttacggcgtcgtcaaagaaggatcgcaaagttccgactgtcacatca
ttgattcttgacgaggcggatgtgttgttggaccccctattccgcgaacagaccatggcg
atctggtctgcttgtcctaacccggagctgagaactacgttctggtctgcgactttcgga
tcaaacattgagactttggtgactgaggcacagttggcgagaccagcatccaaaccgttg
attcgtttggtagtcggtctgaaggacacggccgtccccaacgttacacacaagttgatc
tacaccgcaactgagaagggaaagctattgggtctccgccagctccttcatcccacagca
ggagacgactcggggccacctctccggcctccgttcctggtcttcacccagaccattgag
cgcgccacggccctggaagaggagctcaaatacgacatccccctcgccgccggcggtccc
accagaatcgccgccctgcacagcggcctcgccgacaaggctcgcgcgaacatcatgcgc
cgcttccgcgccggcgagatctggatcctcatcacgacggacgtgctcgcgcgcggcgtg
gactttgctggcgtcaacggcgtcgtgaactacgacgtgcccggctcgagcgccgcgtac
gtccaccgcgcgggacgaaccggccgcgcgggccgcgagggcggcgtcgccgttacgttt
tacacgacggacgatatcccctttgtcaagacggtcgccaacgtcatcgccgcgagcgag
aggcaggcgggcaagaagggcgaggaggcgaacgtgcaaaagtggctgctcgacgcgctg
ccgaacgtgagcaaggaggacaagaagaagattcgggaaaagggcgtcgaggcgaggcgg
agccacggggcggccatgatttcgtcaaagagtaagtgggagaggcgcaaggatgcgaat
agggagggggccacggccgcgaataagattcggattaagaatgcaaggagggtgggtgat
gacgaggctggcgccgaatggggcggtatcgatgattga
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