KEGG   Colletotrichum lupini: CLUP02_13599
Entry
CLUP02_13599      CDS       T08561                                 
Name
(RefSeq) RNA polymerase N/8 kDa subunit
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
clup  Colletotrichum lupini
Pathway
clup03020  RNA polymerase
clup03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:clup00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CLUP02_13599
  09124 Replication and repair
   03420 Nucleotide excision repair
    CLUP02_13599
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:clup03021]
    CLUP02_13599
   03400 DNA repair and recombination proteins [BR:clup03400]
    CLUP02_13599
Transcription machinery [BR:clup03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CLUP02_13599
  RNA polymerase III system
   RNA polymerase III
     CLUP02_13599
  RNA polymerase I system
   RNA polymerase I
     CLUP02_13599
DNA repair and recombination proteins [BR:clup03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CLUP02_13599
SSDB
Motif
Pfam: RNA_pol_N APP1_cat
Other DBs
NCBI-GeneID: 73347547
NCBI-ProteinID: XP_049149683
UniProt: A0A9Q8T2S2
LinkDB
Position
7:join(<1926816..1927138,1927201..1927287,1927351..1927399)
AA seq 152 aa
KAPEVFFDDGDDDFGRQQSQDLKPRNTSRSDVPEPLRSLSEQTSNCHSSISDFLRHNDYP
RSLLLLRQGSSAQMIACDGRLVSNFCCQVTGDLWERYLKLIDDGITDGDAMDQLGLKRYC
CRRMVMTHVDLIEKLLKYTPDGRNEKKMSLNP
NT seq 459 nt   +upstreamnt  +downstreamnt
aaagccccggaagttttctttgacgacggcgacgacgatttcggaaggcaacagtcccag
gacctcaaaccacgcaacacctcgagaagcgacgtaccggaaccgttacggtctctcagt
gaacaaacgtcaaactgccacagctccatttccgactttctcaggcacaatgattatccc
cgttcgctgcttctcttgcggcaaggttcgtcggcacagatgattgcatgcgatggacgc
ctggtatctaacttctgttgtcaggtcaccggagacctgtgggagcgctacctcaagctc
atcgacgacggcattacggatggtgacgcgatggaccagcttggcctgaagcgttactgc
tgccgccgcatggtcatgacccacgtcgaccttattgagaagcttctcaagtacacaccg
gacggtcgcaacgagaagaagatgtccttgaacccgtaa

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