Colletotrichum lupini: CLUP02_13622
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Entry
CLUP02_13622 CDS
T08561
Name
(RefSeq) rhamnogalacturonan lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CLUP02_13622
Enzymes [BR:
clup01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
CLUP02_13622
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GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
73347570
NCBI-ProteinID:
XP_049149706
UniProt:
A0A9Q8WMH9
LinkDB
All DBs
Position
7:join(2010396..2010609,2010669..2010736,2010817..2010957,2011017..2011120,2011173..2011183,2011237..2011514,2011575..2011887,2011952..2012457)
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AA seq
544 aa
AA seq
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MLFLSLLCSLFFLPAVVLAAFGWTDNGSEYVIDSGADLVIKVTKCCGDISSLNYKGVEYN
GWGGKNTHVESGLGTSTVSITSYSNVIKVSVVHGTLKHWIFVRYGNNNVYLFTNKADDSV
SAMRYIVRIPGGIFSHDSTESDFYDASSTIIEAQDINVNSAGLTKSKHYQGSNYGRVMDF
DYVGRKKTGVGLFMIRSNHEKASGGPFFRSLVRRADPTGEDLYDIYYYNMGHTDPMRTGL
QGPSVLAFTAGEDPNSNLFARKADWSWFDDLGLDGWVPASGRGYASGVGLSNMKSGKTYV
VGLSNSAAQYWGTAGSGGAWSITKIIPGTYTLTVYKDELEVATSSVTIKAGAGTAVNTIT
CVDPQDDAVIWRIGEWDGTPKGFLNFEDTPMKPTYMHPSDTRISTWNAGNFIVGTHSANR
FPGYMWKEVNSGYLVYFKLTTAQLAAGHTVRIGITEGYIGGRPAINVNSWASALPAATNQ
ASTRSLTVGTYRGNNVKLTFAVPQSAWIQSTSEWQILTINIISGSSGEKYLSPGVSFDAV
ELLA
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcctttcactcctgtgctcgctgttcttcctgccagcggtcgtcttggcggcc
tttggctggacggacaatggctccgagtatgtcattgacagcggagctgacctcgtcatc
aaggtgaccaagtgctgcggtgatatctcctcgctcaactacaagggcgtcgagtacaat
ggctggggcggcaagaacacccatgtcgaatcaggcctcggtaccagcacggtcagcatc
acgagctacagcaacgtcatcaaggtctcggtcgtccacggcactctcaagcactggatc
tttgtccgctacggaaacaacaatgtctacctcttcacgaacaaggcagacgactctgtc
tcggccatgcgctacattgttcgcatcccgggtggaatcttctcccatgactctacagag
agtgacttctatgatgccagcagcaccatcatcgaggcccaggatatcaacgtcaacagt
gccggcttgaccaagagcaagcactaccaaggctccaactacggccgagttatggacttc
gactacgtcggccgcaagaagaccggcgtcggtctgttcatgatcagaagcaaccacgaa
aaggccagtggcggtcccttcttccgctctctcgttcgtcgcgcggacccgactggcgag
gacttgtacgacatctactactacaacatgggccacaccgaccccatgcgcaccggtctc
caaggcccctccgtcctggctttcaccgcaggcgaggaccccaacagcaacctcttcgcc
cgcaaggccgactggtcctggttcgatgacctcggcctcgatggctgggtgcctgcctcc
ggtcgcggctacgcttccggtgtcggcctctccaacatgaagtccggcaagacatacgtc
gtcgggctgtccaactccgccgcccagtattggggcaccgccggctccggtggcgcctgg
tccatcaccaagatcatccctggaacctacaccctgaccgtctacaaggacgagcttgag
gtcgccacctcctccgtcaccatcaaggctggcgccggcactgccgtcaacaccatcacc
tgtgttgatcctcaggatgatgctgtcatttggcgcatcggcgagtgggatggaaccccc
aagggctttttgaacttcgaggacacccccatgaagcccacttacatgcatccctccgac
acccgcatctccacctggaacgccggcaacttcatcgtcggcacccacagcgccaaccgc
ttccccggttacatgtggaaggaggtcaacagcggttacctcgtctacttcaagctcacc
accgcccagctcgccgccggccacaccgtccgcatcggcatcacggagggctacatcggc
ggccgcccggccatcaacgtcaactcgtgggcctcggccctccccgcggccaccaaccag
gccagcacccgctcgctgaccgtcggcacgtaccgcggcaacaacgtcaagctcaccttc
gccgtgccgcagtccgcttggatccagagcacgagcgagtggcagatcctcaccatcaac
atcatcagcggcagctctggcgagaaatacctcagccctggtgtcagcttcgacgctgtc
gagcttctggcttaa
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