Colletotrichum lupini: CLUP02_13669
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Entry
CLUP02_13669 CDS
T08561
Name
(RefSeq) transcription elongation factor S-II
KO
K03145
transcription elongation factor S-II
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clup03021
]
CLUP02_13669
Transcription machinery [BR:
clup03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
CLUP02_13669
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
CPSF100_C
Motif
Other DBs
NCBI-GeneID:
73347616
NCBI-ProteinID:
XP_049149752
UniProt:
A0A9Q8WLY1
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All DBs
Position
7:complement(join(2166720..2167514,2167627..2167773))
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AA seq
313 aa
AA seq
DB search
MSTGMDQRELESCIKQLNKVVQANEPPATALALLERLKKEAAPTEEMLRSSRAGVFVGKL
RQNSNKEIARAATELVHKWKKLVEAEKQGKIKKGSSPAAPSPTQAPAPKPSSSSALNQPF
KGNTETRRAKADGADVKRTNDAVRDSCIELLYNGLSYRSTASVNDVLNKAIEVELAAHSH
FKGVTKEYREKLRSLFSNLKVKSNRQLGVNVMEGKITPARFVVMTHEELKSEEQRKKEDA
LQQENMKKAQVPMAEKSISDALKCGKCGQKKVSYSQAQTRSADEPMTTFCECTVCGNRWK
VCWPLFHSLYQLC
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactggcatggatcaacgcgagcttgagtcctgcatcaagcagctcaataaggtt
gtacaggccaacgagccccctgcaaccgctcttgctctccttgaacgactcaagaaggag
gctgcccccacggaagagatgcttcggtctagcagagcaggtgtcttcgtcggcaagctt
cgccagaactcgaacaaggaaattgctcgcgccgctacagagctcgtccataagtggaag
aagctggtcgaagccgagaagcagggcaagatcaagaagggatcgtctccggctgctccg
tcgccgacccaggccccggccccgaaaccgtcttcgtcatctgcgctgaaccaacccttc
aagggcaacaccgagactcgccgcgctaaggccgatggcgccgacgtgaagcgcactaat
gatgctgttcgcgattcctgcatcgaactcctctacaatggcctctcataccgatccacc
gcttccgtcaacgatgttcttaacaaggccatcgaggttgagttagctgcccacagccat
ttcaagggtgtcaccaaggagtaccgtgagaagctgcgctccctgttcagcaaccttaag
gtcaagagcaaccgccagcttggtgtcaatgttatggaaggcaagatcactcctgctcgg
ttcgtggtcatgacccacgaggagctcaagtcggaagagcagaggaagaaggaggatgct
ctgcagcaggagaacatgaagaaggcccaggttcccatggccgagaagagtatcagcgat
gctctcaagtgcggcaagtgtggccagaagaaagtcagctacagccaggcgcagactcgc
agtgctgatgaaccgatgacgacattctgcgagtgtaccgtatgcggtaaccgctggaag
gtttgttggccattgtttcattctctttaccaactatgctaa
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