Colletotrichum lupini: CLUP02_14012
Help
Entry
CLUP02_14012 CDS
T08561
Name
(RefSeq) SNARE domain-containing protein
KO
K08486
syntaxin 1B/2/3
Organism
clup
Colletotrichum lupini
Pathway
clup04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
CLUP02_14012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clup04131
]
CLUP02_14012
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clup04147
]
CLUP02_14012
Membrane trafficking [BR:
clup04131
]
SNARE
Syntaxin (Qa)
Stx-PM
CLUP02_14012
Exosome [BR:
clup04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
CLUP02_14012
Exosomal proteins of other body fluids (saliva and urine)
CLUP02_14012
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin
Syntaxin_2
Sec10_N
MSC_0620_UU052
DUF6548
Chordopox_A33R
Rv3627c_N
Prominin
DUF515
Motif
Other DBs
NCBI-GeneID:
73347956
NCBI-ProteinID:
XP_049150092
UniProt:
A0A9Q8T406
LinkDB
All DBs
Position
7:join(3253611..3253890,3253951..3254733,3254787..3255100)
Genome browser
AA seq
458 aa
AA seq
DB search
MAQYGYVSLSHGADGTHDDEYDLSERGILTDEHRYGGRQNPFDQRDDGPGGGYGGGAPAR
GPPQQGFGSGPSPYGGGGNRGYNQGPAMGRDQYGANVEMESLAQNASGFGQSSDPNAILN
ECRSIDQGIDEIEANLNQLRMLQERTLTDADTSANSSTVRQLDALSSETMTLYRGLTDRV
RQVKSSPDGQSARNSPQVGRIDRRLKGAIQQYQQVESAFRKRTQDQMARQYRIVRPDADE
REVREAVEDAGAGAQIFQQAVMQSGRQAQANAVLNAVQDRQAALMKIEQQLNELAQLFQD
MDTLIVQQEAAVTQIEQKGEEVVENLDKGNQEIGTAITTAKATKRKKWWCLGICVLIIII
IAVIVAIYFAIIKPGQAAPAPATTARAKRNIGMLELPDFSNTVPVDTGAAHPQILKTTSR
IMRRMVQQGATWEPTATVQDSAVVARFGGKVDMPAVRN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtacgggtatgtttctctctcccatggagctgacgggacacacgacgacgag
tacgacctctccgaacgcggaatactgacagacgagcatagatacggtggtcgtcaaaac
ccctttgaccagcgggacgatggtcccggtggaggatacggaggaggagctcctgccaga
ggtcctcctcagcagggcttcggctcgggaccttctccctacggcggtggtggaaacaga
ggatacaaccagggaccagctatgggtagggaccaatatggcgccaacgtcgagatggaa
tccctcgcccagaacgccagcggcttcggccagtcgtcggatcctaacgccatcctgaac
gagtgccgatccatcgaccaaggaatcgacgagattgaggccaacctgaaccagctgcgc
atgctgcaggagcgtaccctgaccgatgccgacacatcagcaaactcatcgacggtccgc
cagctcgacgccctctcctccgagacgatgaccctgtaccgcggccttaccgatcgcgtg
cgccaagtcaagtcctcgcccgatggccagtctgccagaaactcgccgcaggtcggccgt
atcgatcgccgcctgaagggtgctattcagcagtatcagcaggtcgagtcggctttccgc
aagcgcacccaggaccagatggcccgccagtaccgcatcgttcgacccgacgccgacgag
cgcgaagtccgcgaggcagttgaggatgctggtgccggtgcccagattttccagcaggcc
gtgatgcagagtggtcgccaggcccaggccaatgccgtgctcaacgccgtgcaggaccgc
caagccgccctgatgaagatcgagcaacagctgaacgagctcgcacagctgttccaggat
atggacacattgattgtgcagcaagaagccgccgttacgcagatcgagcagaagggcgag
gaggtcgttgagaaccttgataagggcaaccaagaaatcggaactgcaattaccaccgcc
aaggcaaccaagaggaagaagtggtggtgcctgggtatctgcgtccttattatcattatc
atcgctgtcatcgttgccatttacttcgccattatcaagcccggtcaggctgctccggct
cccgccaccaccgcccgcgcgaagcgcaacattggcatgctcgagctgcccgacttctcg
aacacggtccctgtcgatactggcgccgcgcaccctcagattctgaagacgacgagccgc
atcatgcgccgcatggttcagcagggagctacctgggagccgaccgccactgtgcaagac
tccgccgtcgtcgcccgcttcggtggcaaggtcgatatgcctgctgtccgcaactaa
DBGET
integrated database retrieval system
