Colletotrichum lupini: CLUP02_14440
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Entry
CLUP02_14440 CDS
T08561
Name
(RefSeq) MutS domain V
KO
K08737
DNA mismatch repair protein MSH6
Organism
clup
Colletotrichum lupini
Pathway
clup03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CLUP02_14440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clup03400
]
CLUP02_14440
DNA repair and recombination proteins [BR:
clup03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CLUP02_14440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_23
AAA_27
DUF5740
AAA_29
AAA_21
Motif
Other DBs
NCBI-GeneID:
73348378
NCBI-ProteinID:
XP_049150514
UniProt:
A0A9Q8WMC5
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All DBs
Position
7:join(4662424..4662696,4662896..4663070,4663122..4665520,4665575..4666249)
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AA seq
1173 aa
AA seq
DB search
MGERSSSAARTPAKTPTLKRQPSSSAGTQKTIVQFFSKSTSVSRSTPTPKPTAKAPDSSP
CLRESKRTNTLPQAPKSSSLTPVPSSDAIEPSRKPVNYAEASDDEDDDPFVRIRTASTRR
RTRTPAAIVDDGDDYEEDAASNDLPEDDDDMIDFVVSDESDEGSQSKKRKRSATSKAASR
KKSHVSSPIKEEEYEGVDDEAMLDVPVPSTAQQWRYDPNNVASATTRTAPTQQARRSLKT
KEKAHTREPEDRYPWLANIVDINKKPRGDPDYDPSSVYIPPGAWNNFSPFEKQYWEIKQK
LWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLDMWVNQFVAKGY
KVARVDQMESALGKEMRERGDTSAKSKKADKIIRRELACILTGGTLVDGSMLQDDLATYC
ASIKESTVDGNPAFGITFVDCATGQFSVTEFEDDTDLTKFETFVAQTSPRELILEKSRIS
TKALRILKNNTSPMTIWNYLKSGSEFWDAETTRRELENSNYFAKEDGGEGAWPDTLAKAK
GKDLLMSALGALVQYLRVLKLEGDLLSQGSFDWYTPIRRNGTLILDGQTLINLEIFSNTV
NGGQDGTLFTLLNRCVTPFGKRLFRQWVCHPLCDIKRINERLDAVDMLNSDRGMREKFTS
QMTRMPDLERLISRIHAASCKPEDFVRVLEGFEQIEYTMELLGEVGGGNGLVERLVASMP
NLSEPLTYWKTAFDRKKAKEDKLLIPERGIEEDFDNSQDRIEAIKEELQTLLTGKKSELK
CKTLKFTDIGKEVYQIEAPKAVKVPRDWRQMSATASVKRYYFDELTDLVRELQEAEETHS
QIVKEVATRFFRRFDADYETWSQSIRIISQLDCLISLAKASSSLGEPSCRPEFVDQERSV
VEFSELRHPCMLNAVADFIPNDIELGGDSPNINLLTGANAAGKSTVLRMSCIAVILAQIG
CHVPATSARLTPVDRIMSRLGANDNIFASQSTFFVELSETKKILAEATPRSLVILDELGR
GTSSYDGVAVAQAVLHHIATHVGCVGFFATHYHSLATEFENHTEIRPRRMQIHVDEEERR
VTFLYKLEDGIAEGSFGMHCAAMCGISSRVIERAEVAAKEWEHTSRLKESLEKAKSGCYI
PLGVLSDVSSLLKGGDELEKRGVEVLLKTIEAL
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgggagagagatcctcctcagccgctcgtacgccggccaagacaccaaccctcaagcgc
cagccgtcgtcatcggccgggacccaaaagactattgttcagttcttctctaaatccacc
agtgtctctcgctcaacaccgactccgaagcccacggcgaaagctcccgactcgtctcct
tgcttgagagagtcgaaacgaaccaatacacttccccaggctccgaaatcgtccagcctt
actcccgtgcccagcagcgatgccattgagccttccagaaagcctgtcaactacgccgaa
gcctccgacgatgaggatgacgacccattcgttcgaatccgaaccgcaagcacacgccgc
cgcacacggaccccggcagccattgtggatgatggcgatgactatgaggaggacgctgca
agcaatgacctgcccgaggacgatgatgatatgattgacttcgtcgttagtgacgagtca
gacgaaggctcgcaatccaagaagcggaaacgttccgcaacaagcaaggccgcgtcacga
aagaagtctcatgtttcgtctcccatcaaggaagaagagtacgaaggagtagacgacgag
gctatgttggatgtcccggttccttcgacagctcagcagtggcgttacgaccctaacaac
gttgcgtctgctaccacccgcactgctcccacgcaacaagctcgtcgttccctcaagacc
aaggagaaggcgcataccagagagccggaggaccgttacccctggcttgccaacattgtg
gatatcaacaaaaagcctcgaggtgaccctgactacgatccgtcgtcggtgtacatcccg
cctggtgcttggaacaacttctcccctttcgagaagcaatactgggagatcaagcagaag
ctgtgggacaccgtagttttcttcaagaagggcaagttttacgagctttacgaaaacgat
gccaccattggtcaccagctctttgatctcaagctgaccgatcgtgtcaacatgcgcatg
gtcggtgttccagagagctcgctcgacatgtgggtgaaccaattcgtcgccaagggctac
aaggttgccagagttgatcagatggagtctgcgctcggaaaagaaatgcgcgagaggggc
gacacttcggccaagagcaagaaagccgacaagatcatccgccgagagctagcctgcatc
ttgactggtggcactctcgtcgatggaagcatgttgcaggacgacctggctacatactgc
gcctccatcaaggagtccacagtggacggcaaccctgcctttggcatcacattcgttgac
tgcgcaacgggtcaattctccgtcactgaattcgaagatgataccgaccttaccaagttc
gagacgtttgttgcccagacgagcccgagagaactgattctggagaagtctcggatctcg
actaaagctctccgcatcctcaagaacaacacatctccaatgactatctggaactacctg
aagtccggcagcgaattctgggacgcagagaccactcgtcgtgagctcgaaaacagcaac
tacttcgccaaggaagatggtggtgagggagcttggcctgatactctggccaaagccaag
ggcaaggacttgctaatgtctgctcttggtgccctggtccagtacctgagggttctgaaa
ctagagggcgacctcctgtcgcagggcagcttcgattggtatactcctatccgccgcaac
ggaacccttatcctcgacggtcagactttgatcaacctggagatcttctccaacacagtg
aacggtgggcaggatggcaccttgttcactctcctgaaccgctgcgtcacaccatttggc
aagcggctgttccgccaatgggtgtgccaccctctttgcgacatcaagcgtattaatgaa
cgcctggatgccgtagacatgctcaattccgacaggggcatgcgagagaagttcacatct
caaatgacgagaatgccagacctagaacgcctcatctccagaatccacgctgcttcctgc
aagccagaggacttcgtgcgcgtgctcgaaggcttcgaacagattgagtacaccatggag
ctattgggagaagttggtggcggcaatggcttggtcgaacgcctggtggcttccatgcca
aatctcagtgagcctttgacgtactggaaaactgcatttgatcgaaagaaggcgaaggaa
gacaaactcctcattcctgaacgtggtatcgaagaagattttgacaatagccaagatcgg
atcgaagccatcaaggaagagctgcagacactcctcacgggcaagaagtccgagctaaag
tgcaagacgctgaagttcaccgatattggcaaggaggtctaccaaatcgaggcacccaag
gccgtcaaggtgccgagagactggcgccagatgtcggcgactgcaagtgtcaagagatac
tactttgacgagctcacagacttggtccgagagctgcaagaagcggaagagactcattca
cagatcgtcaaggaggtggccacgcggttcttccgccgcttcgacgccgattacgaaacc
tggtcgcagtctatcaggatcatctcacaacttgactgcctcattagtctcgccaaggcc
tcgtcttcgctaggagaacctagctgtcgccccgaattcgtcgaccaggaacgcagtgtt
gtcgaattttctgagctgcgtcatccgtgcatgttgaatgcagtggccgacttcatcccc
aacgacattgaacttggcggtgattcgccaaacatcaacctattaactggtgccaatgcc
gcgggcaaatcaaccgttctgagaatgtcttgtattgccgttatcttggcccaaatcgga
tgccatgttccggctacatccgctcgacttactcctgttgaccgaatcatgtcaagactt
ggtgctaatgacaacatttttgcctctcagtcaacattcttcgtggagctgtctgagacg
aagaagatcctggcagaggctacgccgcgctctctggtgattctggatgaactcggacgt
ggaaccagttcctatgacggagttgcagttgcacaggctgtcttgcaccacattgctaca
cacgtgggctgtgtcggcttctttgcgacgcactaccattccctggcgaccgagttcgag
aaccataccgagattcgcccacgtcgcatgcagattcacgtggacgaagaggagaggcgc
gtcacgttcctatacaagctcgaagacggaattgctgagggtagtttcggaatgcactgt
gccgccatgtgcggtatctccagccgcgtcattgagcgtgcagaggttgcagccaaggaa
tgggagcataccagcaggctcaaggaaagcttggagaaggccaagtcaggttgttacatt
ccgcttggtgtactgagtgacgtgtcgtctctgctcaagggcggcgatgagctggagaag
aggggtgttgaggtgttgctgaaaactattgaggcgctgtag
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