Colletotrichum lupini: CLUP02_14863
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Entry
CLUP02_14863 CDS
T08561
Name
(RefSeq) SWIRM domain-containing protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
clup
Colletotrichum lupini
Pathway
clup03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CLUP02_14863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clup03021
]
CLUP02_14863
03036 Chromosome and associated proteins [BR:
clup03036
]
CLUP02_14863
Transcription machinery [BR:
clup03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
CLUP02_14863
Chromosome and associated proteins [BR:
clup03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
CLUP02_14863
PBAF complex
CLUP02_14863
GBAF(ncBAF) complex
CLUP02_14863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
DUF3439
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
73348799
NCBI-ProteinID:
XP_049150935
UniProt:
A0A9Q8WN01
LinkDB
All DBs
Position
8:complement(join(1279695..1281098,1281154..1281713,1281791..1281905))
Genome browser
AA seq
692 aa
AA seq
DB search
MEDQPNYGISNAASPGSNPILSQPPLQPAAPTPGDGAEDVQMTEGPVAEPSIKQDSATPA
PGVTSDNALDAPDGPAPEATQDEEMGGARDETKDGQAAKGGDDAAAGNDAEGQDSKTKET
LENAAREHLISQTHAIVLPSYSTWFDMNTINDIERKAMSEFFNSRNRSKTPAVYKDYRDF
MINTYRLNPVEYLTVTACRRNLAGDVCAIMRVHSFLEQWGLINYQVDAEQRPSHVGPPFT
GHFKIICDTPRGLQPWQPSADAVVSAGKPSADTEKKAAATPVAKSELNLEVSRNIYEASA
KGTKLNKSEPKTNGETPVTNGVSGIEDATKTPIVKVNCHTCGIDCTRLYYHSSQADPNSK
TKYDVCPSCFLEGHLPGNQTSAQFTRMENPTYTTVLDRDAPWSDAEILRLLEGIERMDDD
WNEIADHVGTRTREECVLQFLSLDIEGKYADSDLAVNAPTGLAMLGQQGGHLPFSQADNP
VMSVVGFLAGLADPASTAAAANKSAEELTRKLRKRLEGGNSEEQAVTNGKGKDKDGDSME
IDIRQDVTTTTTTTTTTLATIPMATMGARAAGLVSHEEREMTRLVSAAANLTLQKLELKL
KYFNEMEAILQAERRELERGRQQLFLDRLAFKRRVREVQDGLKAAVETGGDQGLKQAQDA
MSDGANLTFQAAPGAGAVQPLSSGGQIKSFEA
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccaacccaactacggaatttccaacgccgcctctcctggcagcaatcctatc
ctttcgcaaccacctttgcaacctgccgcgcctactccgggagatggagccgaagatgtc
cagatgaccgaaggcccggtcgctgagcctagcatcaagcaggacagcgcgacacccgca
ccaggcgtcacatccgataatgccctcgacgcccccgatggccccgcgcccgaggctacg
caggacgaggaaatgggcggtgcccgcgacgaaacaaaggatggccaagcagcaaagggc
ggcgatgatgctgcagctggaaacgatgcggaggggcaagactccaagaccaaggagaca
ctcgaaaacgcggctcgagaacatcttatctcgcaaacgcacgctatcgttctgccgagc
tacagtacctggttcgacatgaacacgatcaacgacatcgagcgcaaggccatgtccgag
ttcttcaacagtcgcaaccgcagtaaaacaccagctgtctataaggactaccgtgatttc
atgatcaacacctacaggttgaatcccgtggaataccttactgtgacggcctgcagacga
aacttggctggagatgtttgcgctatcatgcgcgtccactcattcctcgagcagtggggt
ttgattaactaccaggttgatgcagagcaacggccctcgcatgtcggcccccccttcact
ggtcacttcaagatcatttgcgacaccccacgcggtctacagccgtggcagccgtctgcc
gacgccgtcgtctctgctggcaagcccagtgccgatacagaaaagaaggctgcggcaaca
ccggtcgctaagagcgagcttaacttggaagtcagccgcaacatctacgaagcaagcgct
aagggtacaaaactcaacaagagcgaaccaaagaccaatggcgaaacgccagtgacgaac
ggagtttcgggtatcgaagatgccaccaagacaccaattgtcaaggtcaactgtcacact
tgcggtatcgactgcaccaggctatactaccacagctctcaggccgacccgaattccaag
accaagtacgacgtttgcccaagctgcttcctcgagggtcatcttccaggcaaccagaca
agcgctcaattcacccgcatggaaaaccctacatacacgaccgtccttgacagagacgca
ccgtggagcgatgccgaaatccttcggttgcttgagggcatcgagaggatggacgacgac
tggaatgaaattgcggatcacgtgggtacgcgaacacgcgaagagtgcgtcttgcaattc
ttgtccttggacattgagggcaagtatgcggactcggaccttgccgtgaatgcaccaacc
ggccttgcaatgcttggacagcagggcggccatttgcctttcagtcaggcggataacccg
gtcatgtccgtcgtcggcttccttgccggcctcgcagaccctgccagtacggcggctgcg
gcgaacaagtctgccgaagagctcacgcgtaagcttcgcaagcgacttgagggtggcaac
tcagaggagcaagctgtgaccaatggcaagggcaaggacaaggacggtgactcaatggag
attgatatccgccaagacgtcactacgacaactactacgacgacgacgacgctggccacc
attcctatggccaccatgggcgcccgggccgctggcctggtgtcccacgaggaacgtgag
atgacaagactagtgtccgctgcggccaacctcactctgcagaagttggagttgaagttg
aagtacttcaacgagatggaggccatcttgcaggcagagagaagagagctcgaaagagga
cggcaacagttgttcttggatcgcctcgcgttcaagcgtcgcgtccgcgaggtgcaggat
ggactcaaggcggcagtcgagacgggtggtgatcaaggtcttaagcaagcccaggatgcg
atgtctgacggagccaacctcaccttccaggcggcgcctggagcaggcgctgtgcagcca
ctgagcagtggagggcagattaagagcttcgaagcttga
DBGET
integrated database retrieval system
