Colletotrichum lupini: CLUP02_14890
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Entry
CLUP02_14890 CDS
T08561
Name
(RefSeq) MIF4G domain-containing protein
KO
K14327
regulator of nonsense transcripts 2
Organism
clup
Colletotrichum lupini
Pathway
clup03013
Nucleocytoplasmic transport
clup03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CLUP02_14890
03015 mRNA surveillance pathway
CLUP02_14890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clup03019
]
CLUP02_14890
Messenger RNA biogenesis [BR:
clup03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
CLUP02_14890
mRNA cycle factors
P-body specific factors
CLUP02_14890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
CDC45
CBP4
FliD_C
Motif
Other DBs
NCBI-GeneID:
73348826
NCBI-ProteinID:
XP_049150962
UniProt:
A0A9Q8WN58
LinkDB
All DBs
Position
8:join(1400513..1400531,1400603..1400647,1400715..1402762,1402836..1403261,1403330..1403596,1403656..1403961,1404020..1404514,1404628..1404780)
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AA seq
1252 aa
AA seq
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MDRARKRELRSLNTRAWDGEQDLFAVSKSLDSSLKKNTAFIKRLRTAVSAATLNTFLQEI
RTLSLHKYLSEIVSACFEGLCRLKSPGEIEAGVEIVSALHQRFGPSEFTEYLGWLLGKGM
ATPDKSLLKSLAPEVREKEEKERLTRQRVLLRIVTELWLVDVLRTLDDVTRPDDATKGAT
GKVAELKPRAQANRSGATEPFPLEVLKDLLGHDREHVNLPLLVIFVKAFSWDILGVKSSA
AEGRKTVEEDGATKTANGIVHGESGGEDQVIDTEDQPFTPPELQEKFKTILKKYFEDVKS
HVVRDQKSIHSQARRNAEAYVKSGEVFEDRQANFEKQMKAQERLVANAQAIADAIGADMP
DLKESDDSLGNTNGSIGLVKAGDYLRGLGDGAGIWEDEDERRFYENLVDLKGKVPGILLD
DGKKKKSDNEEQVGRKVEVTDAPEPPKVPDAAEDQSTSIANKTIGAQVDAVLARLPDLTN
KDVIDQAAIDFCYLNSKASRNRLIKALTEVPKGRGDLLPSWARLAATLGRYMPDIPKGLV
DYLDAEFRSLQRRKDKDFLGQVRLSNIRYLAELTKFGIVPEHVVFHCLKVSLDDFSRMNI
EIICNLLENCGRYLLRNPETSPRMATFLETLQRKKSVQHIGQAERMLIENAVYYVDPPDR
PAIQQKERTPMELFIRKLIYMDMTKRNYSKVLKQIRRLHWEEAEVFSKPGKVKYGNIHLL
AILLSAIYRYHPAFVVRVIDTVMESISFGLEQNDFKFYQRRISEVKYIGELYNYRMVEHP
VVFDTMYKIMTFGHGGPPIPGRLNHFDLPDDFFRIRLIATILETCGMYFAKGAAGKKLDY
FLSFFQQSLPMDIEFIVQDTFALTRPQWKLATNLEEASKAFQLAIAQDQKVSGADKTLEA
DDASIGSSSDDEDGDEHLPEPEADEEESDSDEDAEDNDVDMSHADSDSEDEAIVVTRQQE
QVDPEAEAEFEREYAKMMAESLESRKFERKPLFDVPLPVRGKSKESATAADSGDTGVPAP
SSTMAFSLLTKKGNRQQTRTVEVPSDSTFAVAMKTQQQAEREEQQRIKNLVLNYDLRESE
DPDGNDCPNPIKAHLDIHNPQAGHEKPTSYHHNRTDRGKDRGGQRVRKLQLSDVDWYESS
TKRGNYFARAHTPRSDWDVEAGNDVEQSETPPTYQHGTVHKRHMPAMHSTPRPGDRKEQP
SRSTRRYQYNPLEVAPTAKTSRVQDGSGGSLRQTNPCEAPNAAEYTLVTGAY
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtgctaggaagcgtgaattgcgctccttgaacacccgcgcttgggatggcgag
caagacctgtttgctgtcagcaaatctctcgattcatctctcaagaagaataccgccttc
atcaagcgccttcgaaccgccgtatcagccgcgaccctaaataccttcctccaagagatc
cgcaccctcagcctccacaagtacctctccgaaattgtctctgcctgtttcgagggccta
tgcagactcaagtcccccggcgagatcgaagctggcgtcgaaattgttagcgctctacac
cagcgctttggtcccagcgagttcaccgaatacctaggatggctgcttgggaagggaatg
gcaacgcccgacaagagcttgctcaagtcgttggcacccgaggtccgcgagaaggaggag
aaagagcgcttgacgcgccagcgtgtgctcttgcgcattgttaccgaactttggctggtt
gatgttctgcgaactctcgatgacgttacaagaccagacgacgctaccaagggtgctaca
ggtaaggtcgctgagctgaagcccagagcgcaggcaaacaggagcggcgctaccgagcct
tttccccttgaagtactcaaggatctacttggccatgatcgggaacacgtaaacttgcct
ctactcgtcatcttcgtcaaggcctttagctgggatatcttgggagtcaagtcttcggct
gccgagggacgaaagacagttgaggaggacggcgcgaccaagactgccaacggaattgta
cacggggagagtggcggcgaagaccaagtcatcgacaccgaagatcagccgttcacgccc
cctgagcttcaggagaagttcaagactatcctcaaaaagtactttgaggacgtcaaaagc
catgtcgttcgagaccagaaatcaatccattcccaagcccgccgcaatgctgaggcctac
gtcaagtctggcgaggtttttgaagatcgccaggccaactttgaaaagcaaatgaaggcc
caggagcggctggtagccaatgctcaggccatcgcggacgccattggcgctgatatgcct
gatctcaaggagagcgatgactcgctgggcaataccaatggctcgatcggtctggtcaag
gctggtgactatcttcggggtcttggtgacggtgctggtatttgggaggatgaagatgag
cgacgcttctacgaaaacctcgtcgacctgaagggcaaagttccgggcattcttttggac
gacggtaagaagaagaagtccgataacgaggagcaagtgggcaggaaagtggaagttacc
gatgcaccggaaccacccaaggtcccggacgcagccgaagaccagtccacctccatcgcc
aacaagacgattggtgctcaggtggacgcagtgttggcccgcctgccagatctcaccaat
aaggacgttattgaccaagctgctatcgacttctgctacctcaactcgaaagcctcgcgc
aacaggctaatcaaggctttgactgaagtccccaaaggccgcggagacctgctgccctca
tgggccaggctcgctgctactttgggtagatacatgccggatatccccaaaggccttgtc
gactatcttgatgccgaatttcgcagtctgcaaagacgaaaggacaaagacttcctgggc
caagtgcgcttgagcaatattcgctaccttgctgaactgaccaaatttggcatcgttccg
gagcacgttgtgtttcattgcctcaaagtcagcctcgacgacttctcgaggatgaacatc
gagatcatctgcaatctcttagagaactgcggacggtaccttctgcggaacccagagact
tcaccacgcatggcaacctttctcgagacattgcaacgcaagaagtctgtccagcacatt
ggccaagccgaacgcatgctcatcgagaacgccgtctactatgttgaccctcctgaccgg
cctgccattcagcaaaaggagcgcacccccatggagctgtttattcgcaagttgatctac
atggacatgactaagcgtaattacagtaaggtcttgaagcagattcgcagacttcactgg
gaggaggccgaggtcttctctaagccgggcaaagtcaagtacggcaatatccatcttctc
gcaattcttctcagcgcaatttaccgctatcaccctgctttcgtcgtcagggttatcgac
actgtcatggagtcgatcagcttcgggctggagcaaaacgacttcaagttttaccagcga
aggatttctgaggtcaagtacattggtgaactctacaactaccgaatggttgagcatcca
gtcgtcttcgacactatgtacaagattatgacatttggccatggtggtccgcccatcccc
ggtcgactgaatcatttcgatttgcccgatgatttcttccgcattcgtttgattgcgact
atcttggaaacctgtggcatgtactttgccaagggcgcggctggcaagaagttggactac
ttcttgtcgttcttccagcaatcgctgcccatggatatcgagttcattgttcaagacact
ttcgcccttacacgaccccagtggaagttggcaaccaacctcgaagaggcttcaaaggca
ttccagcttgccatagctcaggaccaaaaggtctcgggagccgacaagacgctcgaggcc
gatgatgcatccatcggatcgtcttcggacgatgaggatggagatgaacatttgcctgag
cccgaggctgacgaagaagagtctgattctgacgaagatgctgaggacaatgacgtcgac
atgtctcacgcggactccgatagcgaggatgaagctatcgtggtcactcgtcagcaggaa
caggttgatccggaggccgaggctgagtttgaacgtgaatacgctaagatgatggccgag
agtttggagtctcgcaagttcgagcgcaagcccttgtttgacgtgccactgcccgtccgc
ggcaaaagcaaggagtcagcaacagcagccgactctggagataccggtgtgcccgctccc
agtagcacaatggccttttcgctcttgacgaagaagggcaaccgtcagcagacgcgtact
gtggaagttccttccgattcaacatttgctgtggctatgaaaactcagcaacaagccgaa
agagaggagcagcaacgcatcaagaaccttgtcttgaactatgatcttcgcgagagcgag
gatccggatggtaacgactgcccaaacccaatcaaagcacacctagatattcacaacccc
caagcaggccacgagaagccaacttcctaccaccataatcgaacagatcgcggaaaagac
cgcggcggacaacgggttcgcaagcttcagctaagtgacgttgattggtatgaatcatca
accaagcgtggaaactatttcgcgcgggcacatactcctcgctccgactgggacgtagaa
gctggcaacgatgtagagcagtcagagactcctccaacatatcagcacggtactgttcac
aagcgtcacatgccggccatgcactctacgcccagaccaggagatcggaaggaacagcct
agccggtctaccagacgctaccaatacaaccccctggaggttgccccaactgccaagact
tccagggtgcaggatggctccggaggctcactgaggcagacaaatccatgcgaggcacca
aacgcggccgagtatactctcgtcaccggagcttactag
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integrated database retrieval system
