Colletotrichum lupini: CLUP02_15240
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Entry
CLUP02_15240 CDS
T08561
Name
(RefSeq) transcription initiation factor IIA
KO
K03123
transcription initiation factor TFIIA small subunit
Organism
clup
Colletotrichum lupini
Pathway
clup03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CLUP02_15240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clup03021
]
CLUP02_15240
Transcription machinery [BR:
clup03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIA
CLUP02_15240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIA_gamma_C
TFIIA_gamma_N
DUF7084
NOA36
Motif
Other DBs
NCBI-GeneID:
73349174
NCBI-ProteinID:
XP_049151310
UniProt:
A0A9Q8WNC7
LinkDB
All DBs
Position
8:join(2489493..2489539,2489609..2489756,2489938..2490090)
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AA seq
115 aa
AA seq
DB search
MAAAPQSFYELYRRSSIGLALTDMLDDLISEERIHPQLAMKILANFDQAITEALQKSVKA
RLTFKGSLSTYRFCDEVWTFLIKNVQFKLDNGGQIVTADKVKIVSCNAKKPGEGP
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcacctcaatcgttctacgagctttatcgccgtagcagcatcggccttgcg
ctgacagatatgctggacgatctcatcagcgaggagcgtattcaccctcagttggcgatg
aagatcctggccaacttcgaccaggccatcacagaggctctgcaaaagagcgtcaaggct
cgcttgactttcaagggaagcctgagcacctaccgattctgcgacgaagtctggacgttt
cttatcaagaacgttcaattcaagctggataatggcgggcagatcgtgaccgccgacaag
gtcaagatcgtcagctgcaacgccaagaagcccggtgaaggcccttga
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