Colletotrichum lupini: CLUP02_15626
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Entry
CLUP02_15626 CDS
T08561
Name
(RefSeq) GYF domain-containing protein
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clup03019
]
CLUP02_15626
Messenger RNA biogenesis [BR:
clup03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CLUP02_15626
Surveillance factors
Other surveillance factors
CLUP02_15626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
73349560
NCBI-ProteinID:
XP_049151696
UniProt:
A0A9Q8WPE2
LinkDB
All DBs
Position
8:join(3834721..3834830,3835070..3839070,3839125..3839450)
Genome browser
AA seq
1478 aa
AA seq
DB search
MPSNLPSSFASAAAGQNANRDARGGRQDGRGAGSGEWARRDGRVNGTLTFRRSSTTPGQP
SQPAASSENAFPSTPLDSGAVPQTPGAATYDYPAPSQYQKDSIVGVYKNGAAEIDASNVF
ESGWTPGHTNGSAARGWGKTNNNHNSQDPAACWNNRGDNNPVAINGMSEEEKEVRRSFGA
GHRVNNANMRQAFASDVNSTLKPPIQKQEGTQGPGPNGRKASLSHGSAAGYGLQSPSSAS
RPGTRRRETTDSNPFGSGPLASPSATRFARDDQQSFLFGRKNNDVKEQEPGEDEGAGQPQ
SKPPFGNLTRSNTAGNPSMGANISSLWGASQPPSAGGAAGGGGGGGMGSFGQFALPTPTS
TIGGGNRGGSRFANLMNKEGTDSPAIKPNEASTPEATRSWRSRPRTDTDPFGGDDNLSGS
AALGGARDTSPPPIPNPTNIGMFETPVKGSTQDFGMSGLNLGRPSENEPGPASPSETNPY
RSPPADRNESQEEGSGEKHHGGVAVGAEQNPGFGTVSRGFPTHAFDGSDRSQTSSAGPRG
YASGWPVPLSTGTPDRERAGFGGGVFGNALFSPMGTDLQSPGLSSIGGGVFGSASAAGLG
GPGTIGRSKLGSLFPAAMQAQMQGHEQENLSDSLPDLRQSNPLGAIGRNNFSVAPRDTGS
PLRSGRGGVFEEMFPSDPTRTHSGFGGADHPGAAGIGHPQAFTPGASTGGEFGSTPVRQM
VMPDRMRWVYLDPQGQVQGPFSGLEMNDWYKANFFTPDLRVKKVEDPEFEPLGQLIRRIG
NSREPFLVPQIGIAHGPPSQAGPFSPSGNVGVIPPLSGVFPSFGRTLTAEEQNNLERRKQ
EEQQAMAQQRDFMMRQQAITRLQGQGPGGVPGSLHHQHSAHSLQSQPSFSSISSPIGPHT
QQPPIGGGAGPTSGFFDSATQQGSTQPPVGSGLDHFREEELATLNASERQMLANVPVPPS
LAGLFPQQPVGAPANEGNLRNHLPGTEQLDKDEEGFRERLKEFEDIRAERDSEQSQEAAT
SQSIQEDVAQDVSAPAMAQAISNEHHKSPAPGMKEIMEEEHQLSLTQRVQQAQAAAEAAK
NAAAGLPMPFPPPLPAAGTPLPAPTAQRVRSNLPEQYNRSQTGTPDTGSATEPPPLAPWA
KEAASRKGPSLKEIQEAEARKAAKAEEVAAERRRLALEQEAAALREREKAIVAATGLPTT
STWGNGSPVAAVSPWTKPAVVKPTPGTSTPSKQKTLADIQREEEVRKLKAKEVAIQTGLA
TAAAGKRYADLATKPNAAPGLAQSSTPAPPPGPGWATVGAGGKVKVPTGPASQTRSVSAA
GIKPVPVVAKPAVKPVATVIAAAPAKGNVAMDEFNKWLHHELSRGLNGVDVDTFAGILVE
LPLEDGIIADAVYANSKTMHGAHFAEEFVRRKRLADKGIVEKQGAVDSKTGSSSSGWNEV
AKKGGNKETPPAAAGDAGIQGAGFKVVPTRKKAGKKSN
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgaatctaccatcaagcttcgcctcggccgccgccggccaaaacgccaaccgc
gacgcgagaggcggtcgacaggacggacgtggagctggcagcggggaatgggctcgacgt
gacggcagagttaacggcaccctgacctttcgacgatcctcgacgacgcccggtcagcca
tcccaacccgcagcctcgtccgaaaacgccttcccctctacaccgctcgactccggcgca
gttcctcagacccctggcgctgcgacatacgactatcctgccccttcacagtatcagaag
gactcaattgtcggtgtgtacaagaacggtgcggcggaaatagacgcttccaatgttttt
gaatcgggatggactccgggacacacaaatggaagcgctgcgcgaggttggggaaaaacc
aacaataaccacaattcgcaagatcctgctgcctgttggaacaaccggggtgacaacaac
cccgttgctatcaatggcatgtctgaagaggagaaggaggtgcgtcggtcatttggagca
ggccaccgggtaaataatgctaatatgagacaggcattcgcatctgatgtcaactctact
ctgaagcctcccatccagaaacaggagggcacccagggaccgggaccgaatggacggaag
gcgtcgctatcacacggtagcgccgccggatacggattacaatcgccctcgtctgcctct
agacctggtacccggcgccgagagacgacggattccaacccttttggcagcggtcccctc
gcttcaccaagtgccacacgattcgctcgcgatgaccaacagtctttcctgtttggtcgc
aagaacaacgacgtcaaggagcaggagccaggcgaggatgaaggtgctggacagcctcag
tctaagccgccttttggaaacctgacgcgtagcaacacggcgggtaatccttccatgggt
gccaatatcagttctctctggggagcttctcagcctccttcggccgggggtgctgctggt
ggcggcggcggcggtggcatgggtagtttcggccaattcgctttgccaactccaacttcg
actattggcggtggcaaccgtggtggaagtcgctttgcaaaccttatgaacaaggaaggc
accgacagtcccgcaatcaagcctaatgaagcctcgaccccagaagcaacccgatcttgg
cgatcccggccccgaaccgataccgaccccttcggcggagacgacaacttatctggcagc
gccgcactcggaggtgctcgagacaccagtcccccgccgatccccaaccctaccaatatt
gggatgttcgagaccccggtcaaaggttcaactcaagattttggcatgtctggactgaac
ctgggacgcccttcggaaaacgagcctggcccagcgagcccgtcagagacgaacccttat
cgcagcccgccggccgaccgaaacgaatcacaggaggaaggatcgggtgagaagcatcac
ggcggtgtggctgtgggcgctgaacagaatcctggcttcggcaccgtgtcgcgcggcttc
ccgacgcacgcttttgacggcagcgatcgcagtcagaccagtagcgctggacctagaggt
tacgcctcaggctggcctgtccctctgtctacgggcactcctgaccgtgaacgcgccggg
ttcggcggcggagttttcggcaatgctctcttcagtcctatgggcactgatctccagtct
ccaggactgtcgagtatcggaggtggcgtcttcggctcggctagtgctgctggcctcggt
ggcccaggcactattggccgcagtaagttgggttctctcttcccagctgccatgcaagca
caaatgcaaggacacgagcaggagaacttgagtgattcgttgcccgaccttcggcagagc
aaccctctcggtgcaatcggccgtaataacttcagtgttgcgcccagagacaccggcagc
cctctccgcagcggccggggaggagtctttgaggaaatgttcccctctgaccctactcga
actcatagcggatttggaggtgccgaccaccctggcgctgcgggcatcggccacccccaa
gcattcactcccggagcttccaccggtggcgagttcgggtcgactcctgtgcgccagatg
gtcatgcctgaccgtatgcgctgggtttatctcgatcctcaaggacaggttcagggccct
ttcagtggtctcgagatgaacgactggtacaaagccaacttcttcactcccgatcttcgg
gttaagaaggttgaagaccccgagtttgagcctcttggacagctcatccgccgcatcgga
aactctcgcgagcctttcctggttccccaaatcggcatcgcccatggcccaccgtctcag
gctggaccattctctcccagcggcaacgtgggtgtcattcctcctctcagtggtgtcttc
cccagctttggtaggacattgaccgcggaggagcagaacaacctcgagcgaaggaagcag
gaggaacagcaagcgatggcacaacagcgagactttatgatgaggcagcaagccatcacc
cgactgcaaggtcaaggcccaggtggtgtcccaggttctttgcaccaccagcacagcgct
cacagcttgcagagccaacctagcttcagcagcatctcctcgccgattggtcctcacacc
cagcagccacccatcggaggtggagccggcccgacgtctgggttttttgactcggctacc
cagcagggatctactcaaccccctgttggttctggactcgaccattttcgtgaagaggaa
cttgccacactgaacgcttccgagcgccagatgcttgcgaatgttccagtcccgcctagt
cttgcaggtctttttcctcagcaaccggtcggcgctcccgcgaatgagggcaacctccgg
aaccacctccccggtaccgagcagttggacaaggacgaagagggatttcgtgagcgcttg
aaagagtttgaggatatccgtgccgaacgcgactccgagcagtcccaggaagccgctacc
agccagagcattcaggaagatgttgctcaagatgtttccgctcctgccatggctcaggct
atcagcaacgagcaccacaagtcccccgcccctggcatgaaggagattatggaggaggag
catcagctttcattgactcagcgtgtccagcaagctcaagctgccgccgaagctgcaaag
aacgctgctgccggccttccgatgccgttccctccccccctacctgcagctggtacacct
ctcccggcccccaccgcccagcgtgtccgttccaacttgcccgagcagtataatcgttcc
cagactggaactcccgacactgggtccgccactgagcccccgccattggctccttgggcc
aaggaggccgctagtcgcaagggacctagtctgaaggagattcaggaagctgaagcgcgc
aaggctgccaaggctgaggaggttgccgccgagcgtcgtcgtttggcgcttgagcaagag
gctgcggctcttcgcgagcgcgagaaggctattgtcgctgctaccggcctgcctaccacc
agcacttggggtaacggctcccctgttgccgccgtcagcccttggaccaagcctgccgtt
gtcaaacccactccaggcaccagcacccccagcaagcagaagactcttgccgacattcag
cgtgaggaggaagtgagaaagctcaaggctaaggaggttgccatccagactggactggct
actgctgctgccggcaagcgttatgccgaccttgcgaccaagcccaatgctgcccctggc
ctcgctcaatccagcacgcccgccccgcctcctggtcccggctgggcgaccgtcggagcc
ggcggtaaggtcaaggtgcccaccggacctgcctctcagacgagatccgttagtgccgct
ggcataaagccggtcccggttgttgcaaagccggctgtcaagcctgttgccaccgtgatt
gcggccgcccctgctaagggcaacgttgccatggatgagttcaacaagtggcttcaccac
gagttgtcccgtggccttaacggagttgatgtggacacttttgctggcatccttgttgaa
ctcccccttgaggatggtatcattgcagacgccgtttacgccaactcaaagacgatgcac
ggagcacactttgctgaagagtttgttcgccgcaagagactcgccgacaagggtatcgtt
gagaagcaaggcgctgttgacagcaagacgggcagctcttccagcggatggaacgaggtt
gccaagaagggcggcaacaaggagacgccccctgctgctgccggagatgccggtatccaa
ggcgcaggcttcaaggttgtgcccacgcgcaagaaggcaggaaagaagagcaactag
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