Colletotrichum lupini: CLUP02_15792
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Entry
CLUP02_15792 CDS
T08561
Name
(RefSeq) Fip1 domain-containing protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
clup
Colletotrichum lupini
Pathway
clup03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CLUP02_15792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clup03019
]
CLUP02_15792
Messenger RNA biogenesis [BR:
clup03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CLUP02_15792
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GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
73349726
NCBI-ProteinID:
XP_049151863
UniProt:
A0A9Q8WPC9
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Position
8:complement(join(4426484..4427025,4427081..4427322,4427393..4427445,4427522..4427728))
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AA seq
347 aa
AA seq
DB search
MDIDEDDDFYADEASTEQPTTNTTTAENAAAPPQEASPKVEAPESKSEELEEGEEEDEGG
AMDEDEDDSDIDIITERKDGTKAAPPTQSRYSDIRNIPQRSASNDMAIKAAPVKEEDSVR
ASPSDLPLGVPSADKAAAAASKSTIDVNANPDYPPVGKPITAVNIDEDLTENEKPWRKPG
TDISDYFNYGFDEFTWALYAAKQEAVRGEFSGDAIAAGQKKMMEDFGMMMMGGMNMPGGG
AAPGANAQAGGMPGMGGMDGMPPEMQAMMQQMMGQGMDPSQMDPSQMSAMFNGMQGQAGN
AGQGGQGQNFNQGFGGNQGQYGGYDQQGMGGGNRGGFGRGRGGRRQW
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgatgaagacgacgatttctacgcggatgaggcgtccaccgagcagcccact
acaaacacaacaacagccgaaaatgctgctgctcctccacaggaggcgtcgccaaaagta
gaggcaccagagagcaaatcagaagagctcgaggagggcgaagaggaagacgagggcggc
gccatggatgaagacgaggatgattctgatatcgacatcatcaccgagcgcaaagatggc
acaaaggctgcacccccgacacaatcccgctacagcgacatcagaaacatcccacaaagg
tcagcctccaacgacatggctatcaaagcagccccagtcaaggaggaggattccgtgaga
gcctcaccctccgacctccctctcggtgtccccagcgccgacaaggctgctgccgcggct
tccaaatctacgattgacgtcaacgcgaatcccgattaccctcccgtcgggaagcccatc
accgcggtcaatattgacgaggacttgaccgagaacgagaagccctggcgcaaacccggt
accgatatcagcgactacttcaattacggcttcgacgagttcacgtgggcactctacgct
gccaagcaggaagccgttcgtggagagttcagcggcgacgccattgccgccggccagaag
aagatgatggaggactttggcatgatgatgatgggcggaatgaacatgcccggcggaggc
gccgcgcctggcgccaacgcgcaggctggaggcatgcccggaatgggtggcatggacggt
atgccgcccgagatgcaggccatgatgcagcagatgatgggtcagggcatggatcccagc
cagatggacccctcgcaaatgtcggccatgttcaatggcatgcagggccaggctggcaac
gctggtcaaggcgggcagggacagaacttcaaccagggctttggcggaaaccaaggacag
tacggaggctacgaccagcagggcatgggaggcggcaaccgcggcggattcggccgaggc
cgtggcggacgccgccagtggtag
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