Colletotrichum lupini: CLUP02_15996
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Entry
CLUP02_15996 CDS
T08561
Name
(RefSeq) tuftelin interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clup03041
]
CLUP02_15996
Spliceosome [BR:
clup03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
CLUP02_15996
Other components
Complex C specific factors
CLUP02_15996
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
G-patch
TIP_N
G-patch_2
Motif
Other DBs
NCBI-GeneID:
73349930
NCBI-ProteinID:
XP_049152067
UniProt:
A0A9Q8T733
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All DBs
Position
9:join(278568..278986,279304..279319,279575..282013)
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AA seq
957 aa
AA seq
DB search
MGFARDLLKGQAGMLNAFMPRKSHLAFIRHIFMYARLTTLAEWYVDVIDVARLHAIALLA
EPVKSQRIWASADPVNASDFIDAFRELRPDNKLIPEKQADEGRDISELPPAAKAEKLLQE
YFGQGWTPLKESLAAGIRDLYCIPKQRAVFHVRTPLCAALSLANSMASFPTFDPSRLTKK
AAAHYSSESEDEEEDDYLAPVTDPSQADDYSDLNPRKRRRVGNTKESAALGIFASDSEDD
GPGKRWKKKTLRSKGMNFVSTGTTTLDEDDDDDARDTNTKEYSDDSNADDDEDDEDDVGG
VGLGFGGARGGLGFQPAQNDNESDEDEKATGAPARSFAKTKFDGKNILGRGFVPSSANVP
VLNPDLQDTPSMPKMARPSAFGAKGAKGKPNPKSFGARMMAKMGYQEGTGLGKEGQGRSV
IIEAHLRPQGVGLGAVKEKSEHERKEEKRQAKLRGEEVVDSEEEERKRKRERKKKVASAG
GSSSVSTPKRQKPKYMTAEEIKKSAPGLHIPEAFAPILDMTGPGNKLLTTASGLLTPTSA
AVVESPELVAARKLVKRAHADLAAFSEEWRNLEERKTWVDLELREREQEMAELASDLGRL
QLFSNIVTNELPLATEWEDVIRCLEKAVQNIGPATDEISDLAVAAIYPFFRDPDWNLLED
PTRFATELKGLGSLLMRPGEGNKALHKWESTGLNSNDLYRQHQKATTPYETMMYKLWYTR
AMSAIRDWDVFNPAPLLAVLEAWADLLPPFVRAQFLDAVVRKLETAVAEWNPKKKRQSHK
LPHLWLFPWLQYLPSYHLEPKGTGLVAEVRRKYRQLIDVWDFDRGVIPGLEQWRDVLGDQ
WRSLIMSHVLPAMGRYLRKNFRVDPSDQEPYLPMLTGVLEWSDILTPKVLGEVIVTEVFP
LWHEKLSEWLGLEDANFEEIMAWYEWWRDDVLPDSVKNLKSVQAEFNKGMGTIEKAL
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgctcgtgatctgctcaagggacaggccggcatgctcaacgcctttatgccc
cgtaagtctcacctggccttcatccggcacatcttcatgtacgccagactaacgactttg
gcagagtggtacgtcgacgtaatcgacgtcgcacgtcttcacgccatcgccctgctcgcc
gagcccgtcaagtctcagaggatctgggcctccgcagaccccgtcaacgcatccgacttc
attgatgctttccgtgagctgagaccggacaacaagctgatcccggagaagcaggcggac
gaggggcgtgatatcagcgagcttcccccagcggccaaggctgagaagttgctgcaggag
tactttggtcagggctggacaccgctgaaggagagtttggctgcgggaattcgtgactta
tattgcattccgaaacaacgcgccgtctttcacgtacgaacacctctttgcgccgctttg
agcctggctaacagcatggccagctttccaactttcgacccttctcgcctgacgaagaag
gcggctgctcactactcttcggaatcagaggacgaggaagaagacgactacctagccccc
gtcacagacccgtcgcaagccgatgattacagcgacttgaacccacgaaagcgccgtcgc
gtcggcaacaccaaggaaagcgccgcgctcggaatctttgcgtcagatagcgaagatgac
ggccctgggaagcgatggaagaaaaagacactccgcagcaagggcatgaactttgtttct
accggcacaactactctcgacgaagatgacgatgacgacgcgagggacaccaatacgaag
gagtactcggacgactccaatgccgatgacgatgaagacgacgaggatgacgtcggaggg
gttggtcttggatttggtggagcccgcggtggcctgggatttcagcccgctcagaatgat
aacgagagtgacgaggacgagaaggcaactggcgccccagcacgatctttcgcaaaaaca
aagttcgatggcaaaaacatcctcggccgcggcttcgttccatcgtctgcgaacgtgccg
gtcctgaaccccgacctccaggacaccccttcgatgccaaagatggcccgcccaagcgca
tttggcgcaaagggagcgaaaggaaagccgaacccgaaatcattcggtgcgcggatgatg
gccaagatgggttatcaagaaggaacaggtctcggaaaagaaggacaaggtcgaagcgtt
attatcgaagctcacctcagaccacagggtgtcggtctaggtgccgtcaaagaaaaatca
gagcacgagaggaaggaggagaagcgacaggcgaaactacgaggcgaggaagtagtcgac
tcggaggaagaggaacggaaaagaaagcgagaaaggaagaagaaggtcgcaagcgcaggc
ggcagcagcagcgtcagcactcccaaacgacagaagcccaagtacatgacggcggaggag
atcaagaagtctgctccaggactccacatccccgaggcatttgcgcctatactggatatg
acaggacccgggaacaagcttctgacgactgcttctggactcttgacgcccacttctgcc
gcagttgtcgaatctcccgagctggtggctgcgcggaagctggtgaagcgagcacatgcc
gacctagcagccttttcggaagagtggagaaacctggaagagcgaaagacttgggtagat
ctggaactgcgcgaaagagagcaggagatggcggagctcgcctcagacttgggaagactg
caactgttttccaacattgtcaccaacgagcttccgttggctactgaatgggaggacgtc
attcgctgtctagagaaggccgttcagaatattggaccagcgacggacgaaatctcggac
ctcgcggtggctgccatctaccccttcttccgcgaccccgattggaacctactggaggac
cctacgcggtttgctactgagcttaagggtcttggaagtttactgatgaggcctggcgag
ggcaacaaagccttgcacaagtgggaatccactggtctgaacagcaacgacctataccgg
caacatcaaaaagcgacaacaccttacgaaaccatgatgtacaaactgtggtacacaaga
gccatgtcggccatccgggattgggatgtttttaaccccgcaccgctactggctgtatta
gaggcatgggcagacctgctgcctccctttgttcgcgcccagttcctcgatgccgtcgtc
cgcaagttggaaacagccgtagcggaatggaatccgaaaaagaagagacaaagccataaa
ttgcctcatctgtggctttttccctggcttcagtacctgccctcgtaccacctggagccc
aagggcaccggcttggttgccgaagtacggaggaagtacagacagctcattgatgtttgg
gactttgatcgcggcgtgatccctggcctggaacagtggcgtgatgtgcttggtgaccaa
tggcgctccttgatcatgagccatgtgttgccggccatgggacgatacctgcgcaagaac
tttagagtagacccgagcgaccaggagccatacctgcctatgctcacaggcgttctcgag
tggtctgatatcttgacgccgaaggtgctgggcgaggtcattgttacagaggtgttcccc
ttgtggcatgagaagttgagtgagtggcttggtctggaggatgccaatttcgaggagatc
atggcatggtatgagtggtggagagacgacgttttgcccgactctgtgaagaacttgaag
tcggttcaagcagagttcaacaagggcatgggcactattgagaaggcattgtaa
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