Colletotrichum lupini: CLUP02_16496
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Entry
CLUP02_16496 CDS
T08561
Name
(RefSeq) uncharacterized protein
KO
K25178
coiled-coil domain-containing protein 174
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clup03019
]
CLUP02_16496
03041 Spliceosome [BR:
clup03041
]
CLUP02_16496
Messenger RNA biogenesis [BR:
clup03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CLUP02_16496
Spliceosome [BR:
clup03041
]
Complex C
Other components
EJC/TREX
CLUP02_16496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
73350428
NCBI-ProteinID:
XP_049152565
UniProt:
A0A9Q8T814
LinkDB
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Position
9:complement(1981567..1982751)
Genome browser
AA seq
394 aa
AA seq
DB search
MRPGKILPPTPPPRRTPPLYIATSNTASIPLDFWSTRVILSEHTKMQHTKTPQDPNLYGQ
PPPKKRKNDTALGSSLDFTAQLTSLMSATPSSTSSAPARPRPSKARSSLFGGKGRDNDRQ
KKKSADAASSSNKLNLKDPLGTEEETSNLASARRKMEEKARLYAAMKRGDYVPKENEAAP
LIDFDRKWAESEDKKNGRREDASSSGSDDNESDGDGNDEDNTIIEYEDEFGRLRRGTKAD
KERLERQRWRGLLGAEELERMSARPAAPAKLLYGDAIQTMAFNPEDPEKMAELAKKRDRS
ATPPEARHYDADSEIRTKGTGFYKFSKDEETRQKEFQGLEEERVRTEAARKEREEKKEAR
RKEIEQRRKEVEARRAKKMAENFLDGLAADMKEE
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccaggcaagatcctcccacctacaccacctcctcgacgaacgccaccattgtac
atagcgacgtcaaacacagcaagcattcctttggatttctggtcaacccgagtgatactc
tcggagcacaccaagatgcagcacaccaagaccccgcaagatccaaacctctacggtcaa
ccgccgcccaagaagcgcaaaaacgacacggccctcggcagctcgctcgacttcacagcc
caactcacctccctcatgtcggccacgccctcctcaacatcctccgcaccagcacggcct
cgaccctccaaggcacgatccagcctctttggcgggaaaggaagagataacgacaggcag
aaaaagaaatccgccgacgcagctagcagcagcaacaagttgaacctaaaagacccgctc
ggcacggaagaagaaacgtcaaacctcgccagcgcacggcgcaagatggaagagaaggca
cgcctctacgcagccatgaagcggggcgactacgtccccaaggagaacgaggcggcgccc
ctcatcgactttgaccgaaaatgggccgaatccgaggacaagaagaacggccgccgggag
gatgcgagctcaagcggctccgacgataacgagtccgacggcgacggcaacgacgaggac
aacacaatcatagaatacgaagacgaattcggccgtctccgccgcggcacaaaagcagac
aaggaacgcctcgagcgccagcgctggcgcggcctcctcggcgccgaagagctcgaacgt
atgtcggcccgccccgcggccccggccaagctgctgtacggcgacgccatccagaccatg
gccttcaacccggaggaccccgaaaagatggccgagctggccaagaagcgggaccgcagc
gccacgccgcccgaggccaggcactacgacgccgacagcgagatccgcacaaagggcacg
ggcttttacaagtttagcaaggacgaggagacgaggcaaaaggagtttcaggggctcgaa
gaagaaagagtgcggacggaggcggcgaggaaggagagggaggagaagaaggaggcgagg
cgcaaggagattgagcagcggcggaaagaggtcgaggccaggagagccaagaagatggct
gagaactttttggacgggctggccgccgacatgaaggaagagtga
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