Colletotrichum lupini: CLUP02_16539
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Entry
CLUP02_16539 CDS
T08561
Name
(RefSeq) nucleoporin autopeptidase
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
clup
Colletotrichum lupini
Pathway
clup03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CLUP02_16539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clup03019
]
CLUP02_16539
03036 Chromosome and associated proteins [BR:
clup03036
]
CLUP02_16539
Messenger RNA biogenesis [BR:
clup03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CLUP02_16539
Chromosome and associated proteins [BR:
clup03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CLUP02_16539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
73350468
NCBI-ProteinID:
XP_049152605
UniProt:
A0A9Q8T839
LinkDB
All DBs
Position
9:complement(join(2211601..2211708,2211770..2213350,2213402..2213641,2213759..2217477,2217557..2217676,2217776..2217884))
Genome browser
AA seq
1958 aa
AA seq
DB search
MSGFGSTGFGGFGSTNNQQSTGFGGFGATNNTTASTGFGSGNTTNNAFGSTGTTNTGGGL
FGGGGGTTSAFGGTSSGFGANTGSTFGAAKPAFGATPSTGGGLFGASSTTNTTAAPSTGF
GGFGANTTTTNTSSPFGGTSGGGLFGSANKPAFGSGTANTTGGTSLFGGTTSTGFGGTTN
TASGGFGATMNPGIGSNVGDPPGTAITPFQAHQEKETTGAGNQSNSFQNILFQEPYKKWS
SDELRLADYAQGRRHGNASGGGAFGVSNFGSGGFGATNNQQTTGFGTGASTGGGLFGGGA
NNTTNATTTTGAFGGGSTGGFGAGGGGLFGNNAAKPATGGGLFGSGTATTAAPAQSGGLF
GGGSTGGFGATGTTGGFGATNNNTGGGLFGSNNNTATQNKPSGFSFGNTGATTGGFGNTA
TTGFGANNNTAGNASTTGGLFGSNTGQATGGGLFGNNQAQPQQQNTGSAFGGGFGQQNQQ
TGGGGLFGNTQQKPATGGGLFGGGGGGATTGGGLFGGGNTSSTSFGATNTNTNTGGGLFG
AKPAATGGGLFGSNPAGQTNNAGGGLFGGGLGQNNQTQQQTGQTSLFGGAQNQAKPGGLF
GSSQPASSGMFGGQNNQQQGGMFGGANQQQQQPQNSLFGGSLLGNSQGVSQGPQSLTANI
NDVSAYGSPSLFSNLGGSETPNPGPLATPLSSKSKPRRSSILPMYKLNPASAARFVTPQK
RGFGFSYSTYGTPGGSPSSAASTPGGASRSLLGSSSFNRSLSKSVSTSNLRRSFNAEDSI
LAPGAFSASSGPRYYGQNGSVKKLIINKDMRSDLFSTPTKEKPSTDLVNGSRKLSKRVSF
DTSTMDTPEVDDNDSVLGSVPRVGNVAQESTPTSVNVNGSKPASATAEADPSKGKELTIV
HEEDISSQTPEVNKEGLDAAPGAYWMSPTKEALANMNRMQRQQVTNFTVGRDNVGSVRFK
VPVDLTNIDLDEIFGGIVILETRSATVYPIAAKKPPVGKGLNVPALISLEQSWPRGRDKR
PSNDAKRFNKHIERLKRIEDTTFESYNTDTGVWKFSVEHFTTYGLEYDEDDDEPEQSAVQ
QPQEEVSFSNASQEDSYDSQSSPREDDTFDFRRNKRRALPGAFDQRDEDFGDIEDAQRPS
QRPSFLGDSFAGPTSNALILSTEEETDDQDNGYGTSEDEDMVGTPVRRHLAAEQPIDSPE
GDGTAPTSETPGGILRARMRALKGSATPMKLQVAGGDEWMDMLQRSVSPQKRDRAFLRSV
NETALRPAADDADAASQRGRVVSDGRGFATSIDLMNSLFEKAKAPPAPTQTRGFIQWPYE
RQTKSFVDQSDMSDADHAFHSSMRPTWGPDGTLLFTSTRSSLEDASKKGAASNLMITKNV
IQAEGREIQAAKFSNEDSAKALENHIRLTNVELVGDVPKLSLQPGSLKSLFHDQDSGNPA
NANEKLVWDLACILFDGDASTESRRSTLSQFWATLVDSASSRSVALAKSSEEKAIAALSG
HRVQDACKHLLDGKDFHLATLVSLIGSSDQSKKDMREQLSEWQDANFLSEFSDPVRAIYE
ILSGNVCVCEGKKEVPLHDRIESFVISERFGLDWKQAFGLRLWYSISRKDDLSAAVRVFK
EDVTQDREQRPQTWYVEQGIPALWEDQNQDLREDLLWGLLKLYADSETDLEAVLRPENSQ
LSPLDVRLSWQLSRALLSTGKVAYGRDATEKADALTISFADQLINEGSWLEATFVLLHLS
QADRRAKAVQDNLCRHAALLGPENGSNFATLAHTLKVPASWIWDAQALYMRAVKRDAASE
VQCLLRAGSYFEAHEVFVHKVAPSAVISRDYNELASILARFEDHKNDIAGWTLGGEVYKA
FLELVDSRRQRQQVSSSTLEKLVAGLPAMREHAESANVTSMAAISEMSSTVAKVMVETSR
QDQDVPRVLGLPVTEDGHLKHSLQLGLSYYEGLMAGAR
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atgtccggctttggcagcaccggcttcggcggctttggctcgaccaacaatcagcaatct
actggttttggcggcttcggggctaccaacaacaccactgctagcactggcttcggctct
ggcaacactacaaacaatgcctttgggtctaccggtaccaccaataccggtggcggcttg
tttggcggcggcggcggcacaaccagtgcttttggcggcacatcatcgggattcggcgcc
aacacaggctcgacattcggtgccgcgaaacccgcctttggggccactccatctaccgga
ggtggcctgttcggtgcatccagcactaccaacacaacagccgctccatctacaggattc
ggcggctttggcgccaacaccacaaccacgaatacctcatcgcctttcggaggcacctcg
ggcggaggcttattcggcagtgccaacaagcccgctttcggctccggcaccgctaatact
accggcggcacatcgctctttggcggtaccacgtctactggtttcggcggaactacgaat
actgccagcggtggcttcggcgcgaccatgaaccccggcatcggatccaacgttggcgac
ccaccaggcaccgcgatcacccccttccaagcacaccaagagaaggagactactggagct
ggaaatcaatccaattccttccaaaacatcctgttccaagagccgtacaagaagtggtcg
tccgatgagttgaggttggctgactatgctcaaggccgtcgtcatggcaatgccagtgga
ggaggagcctttggtgtttccaactttggcagtggcggattcggagcaacgaacaaccag
cagaccacaggattcggaacaggcgcctctactggaggaggccttttcggtggtggagcc
aacaacaccacaaacgcaacaacaaccactggcgcctttggaggtggttctaccggaggt
ttcggtgctggcggcggcggcttgtttggaaacaatgccgctaagccggcgaccggggga
ggccttttcggtagcggaacggcgaccacagcggcgcctgctcagtctggcggtctcttt
ggcggtggttctactggaggtttcggcgccacgggtaccactggtgggttcggggctact
aacaacaacactgggggcggtcttttcggctcgaacaacaataccgctacccaaaacaag
ccgtcaggctttagcttcggaaacactggagcgactactggtggctttgggaacaccgcg
accaccggcttcggtgcgaacaacaacaccgccggcaacgccagcactacgggtgggcta
tttggaagcaacaccggacaagctacaggtggtggcctctttggcaataatcaagcacag
cctcagcagcagaacaccggctcagcatttggtggaggattcggtcagcaaaaccagcaa
acgggtggcggtggactattcggaaacacccagcagaagccagcaacaggcggtggtctc
tttggaggcggcggcggcggcgcgacgacaggtggaggacttttcggcggtggaaacact
tcttccacctcatttggtgccacgaacacgaacaccaacactggcggaggtctctttggc
gcgaagccggcagctaccggcggcggtttgtttgggtccaacccggcaggacagaccaac
aacgcaggtggcggcttgttcggcggcggcttaggccaaaataaccagactcagcaacag
actggacaaacttctctatttggaggagcccaaaaccaggccaagcctggtggcctgttt
ggctcatctcaacccgccagcagcggcatgtttggtggacaaaacaatcaacagcagggc
ggcatgttcggaggtgctaaccagcagcaacagcaaccgcagaactccttgttcggtggt
tcactgctgggcaattcccaaggggtcagccaaggcccccagtctctcacggccaacatc
aatgacgtctctgcctatggctcgccgtcgctcttctccaacctgggaggctcagagacg
cctaatcctggacctttggccacacctctttcaagcaagtctaagcctagacgtagctcg
atcttgcccatgtacaagttgaatcccgcgtcagccgctcgcttcgtcactccccaaaag
cgaggctttgggttttcatacagcacctatggtacacccggaggcagtccttcaagcgca
gcgagcacccctggcggtgccagtcgaagcttattaggttcctcgagcttcaaccgaagc
ttgagcaagagcgtgtcaaccagcaacctgcggagaagcttcaatgctgaagatagcatc
cttgcacctggtgctttctctgccagctctggaccccgctattacggccagaacggaagt
gtcaagaagctgatcatcaacaaggacatgcgcagcgacctattctctacacctaccaag
gaaaagccgtctactgatctggtcaatggctctcgcaagctgtcgaagagggtcagcttc
gatactagcacgatggacacccctgaagtcgatgataatgacagtgtcttgggatctgtg
ccaagagtcggaaacgtcgctcaagaatcgactccgaccagtgtcaacgttaacggaagc
aagcccgctagcgctaccgcagaggcagatcccagcaagggtaaagagctgactatcgtc
catgaggaagatatttcctcccaaacacccgaagtcaataaggagggtctcgacgccgcc
cccggtgcctactggatgagcccgaccaaggaagctctcgccaacatgaacagaatgcag
cgtcaacaagtcacaaacttcactgtgggtagagacaacgtcggcagtgttcgcttcaag
gtccccgtcgatcttaccaacattgatctggacgagatctttggtggaatcgtcattctt
gaaactcgatctgcgactgtttaccccattgcagccaagaagcctcctgtcggcaagggg
ctgaatgttccggctctcatttctctggaacagtcgtggccacgtggtagagacaagcgc
cctagcaacgatgccaaacgtttcaacaagcacattgagcgcctgaagcgcatcgaagac
acaacctttgaaagctataacaccgatactggcgtgtggaagttctctgttgaacatttc
accacctacggcttggagtatgatgaagatgacgatgagccagagcagtctgcagtccag
cagccccaggaggaagtttctttcagcaacgcttctcaggaagactcctacgattcgcag
tccagcccaagggaagatgacacctttgacttccgcagaaacaagcgacgcgctcttcct
ggcgcattcgaccaacgtgatgaagacttcggtgacatcgaagatgctcaacgcccctcc
cagcgcccgtcttttttaggggatagcttcgcgggtccgacgtccaatgcgctcattctg
tcgactgaagaggagacagacgatcaggacaacggatatggcacgtctgaggacgaggac
atggtgggtactccagtcagacgccatcttgccgcggagcaaccaatcgactcgccggaa
ggcgatggaactgccccaacaagcgaaacaccaggaggcattcttcgagcaaggatgcgg
gcactgaagggttcggctactcccatgaagcttcaggttgccggtggagacgagtggatg
gacatgcttcagcggtctgtcagccctcaaaagagagatcgggcgttcttgcgaagtgtg
aacgagacagcattgcgtccagctgccgacgatgccgatgcagcaagccagagaggtcga
gttgtgtcagacgggcgtggattcgctacaagcatcgatttgatgaactcgctgtttgaa
aaggcaaaggcgccgcctgcgcctacgcagacgagaggctttattcagtggccctacgag
cgacaaaccaagtctttcgttgaccagtccgatatgagtgatgccgaccacgcctttcac
agttcaatgaggcccacctggggacccgacggaacgttgctgttcacatcgacccgttcg
tctcttgaggatgccagcaagaaaggcgcagccagcaacctgatgatcacgaagaatgtc
atccaagcagaagggcgagaaatccaggcggccaaattttccaatgaggactctgctaaa
gccctcgaaaaccacattcgcctaaccaacgtggagctcgtcggggatgtcccgaagctg
tcgttgcagcctggttcgctcaagtctcttttccatgaccaggactcaggcaaccccgcg
aatgcgaacgagaagcttgtttgggatcttgcttgcattctgtttgacggcgacgccagc
actgagtctcgcagaagcacgctatcccaattttgggcaacgcttgttgactctgcatca
tcacggtctgttgctcttgcaaagtccagcgaagagaaggccattgcagccttgtctggt
caccgtgtccaagatgcctgcaaacacttgctagacgggaaggatttccaccttgcgacg
ctagtatcattgattggtagcagtgaccagtcaaagaaagacatgcgcgagcaactcagc
gagtggcaagatgctaacttcctgtctgagttctccgaccctgtccgagcgatatacgag
attctgagcggcaacgtgtgcgtgtgtgaagggaaaaaggaggttccccttcatgaccgc
attgagtcatttgtcatttccgaacgatttggcttggattggaagcaagcatttggtctt
cgcttatggtactcaatctcgcgcaaagatgacctttcggccgcggtccgcgtgttcaag
gaggacgtgactcaggacagggagcagcgtccacagacgtggtacgttgagcaaggcatt
ccggcactctgggaagaccaaaaccaagacctgcgggaagacctcctatggggcttgctc
aagctgtacgcggacagcgagaccgatttggaagctgtcctgcggccagagaacagtcaa
ctgtcaccactggacgtccggcttagctggcaactgagccgcgcgctcctctctactggc
aaggttgcttacggtcgcgacgcgacggaaaaggctgacgctctgacaatttccttcgcc
gatcagctcatcaacgagggcagttggctggaggccacctttgtgctgctgcatctcagc
caggcagacagaagggcgaaggctgttcaagataacctttgccgtcatgctgctcttttg
ggtccggaaaacggaagtaacttcgccacgctcgctcacactttgaaggtgccggcctct
tggatttgggatgcccaggctctttacatgcgagcggtgaagagagatgctgcttccgaa
gtgcagtgcctactccgtgccggctcatatttcgaggcccacgaggttttcgtgcacaaa
gttgcgccttctgccgtcatcagccgcgattataatgaactggcctctattttggcccgt
tttgaagaccacaagaacgacatcgcaggctggactctgggtggtgaggtctacaaggcc
tttttggagcttgtggatagtcgcaggcagcggcaacaggtctcctcgtctaccctcgag
aagttggttgcgggccttcctgccatgcgcgagcatgcagagagtgccaacgtaacgagt
atggcagccatctcagagatgagctcaacagtagctaaggttatggtggagacgtccaga
caagaccaggatgttcctcgtgtactaggtctccccgtcacagaggacggtcacctcaag
cactcactgcaactgggtctttcctactatgaaggattgatggccggagccagatag
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