Colletotrichum lupini: CLUP02_17189
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Entry
CLUP02_17189 CDS
T08561
Name
(RefSeq) rhamnogalacturonase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CLUP02_17189
Enzymes [BR:
clup01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
CLUP02_17189
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GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
NOMO1-like_2nd
Motif
Other DBs
NCBI-GeneID:
73351113
NCBI-ProteinID:
XP_049153250
UniProt:
A0A9Q8T9S5
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Position
9:join(4567924..4569522,4569581..4569610)
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AA seq
542 aa
AA seq
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MALNTLLQVFFFTILSFASSALAAFGVTTSGSNFVVDAGSSNTLVFQVSKSSCDINSIKY
RGNELQYASKGSHISSGLGTATVEATTITASTGKVIKVTCTTSTLTHYLIVKEGEANIYM
ATYITAEPDIGELRWISRLNKDILPSEYPFGVVSTIAGSSSTVEGSDVFVVSGQTRSKFY
SSERFIDDKVRCVYGTSPEEIHVCVSVEPKTGFELSSGGPFFRDINTNNAGDSTNLYNYM
NSNHAQTEAYRMGLHGPYVQSFSRSGIPKNTDFNYDFFSELSLKGYVAASGRGTVSGTAS
GITGSFQRVVHWYNANAQYWTYASSTGAFTSPLMKPGTYTMVLYQTEFKVATSSVTVSAG
KTTTANIASTLAARTTLWKIGEYDGQPTGFRNADKQLRMHPSDSRMSSWGPLTYTVGTSA
VSDFPMAIFTAVNNPVTIKFNLASAPGAATLRIATTLAFASGRPQAKVNSWTGPAPAAPT
KIDSRGVTRGAYRGLGEVYDVSIPAGTLVSGANTITINVISGSSGDTYLSPSVIFDTVEL
FQ
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgaacactcttcttcaggtcttcttcttcaccatcctttccttcgcctcatct
gctttggccgccttcggcgttaccacctcgggtagcaacttcgttgtcgatgccggctca
tccaacactctcgtcttccaagtttccaagtccagctgtgacatcaactccatcaagtac
cgtggcaacgagctccagtatgccagcaagggcagccacatcagctctggtctcggaacc
gccaccgtcgaggccaccactatcacggccagcaccggtaaggtcatcaaggtgacctgc
accacctcgactcttacacactacctcattgtcaaggagggtgaggccaacatttacatg
gcgacctacatcaccgcagagccagacattggtgagctccgctggatctcgcgtctgaac
aaggacatcctccccagcgaataccccttcggcgttgtttccaccatcgccggctctagc
tccaccgtcgagggctccgatgtcttcgtcgtcagcggccagacccgatccaaattctac
tccagcgagcgcttcatcgatgacaaggtccgctgtgtctacggtaccagccccgaggag
atccacgtctgcgtctccgtcgagcccaagactggtttcgagctctcctccggcggcccc
ttcttccgcgacatcaacaccaacaacgctggtgactctaccaacctgtacaactacatg
aacagcaaccacgcccagaccgaggcctaccgtatgggtctgcacggcccttacgtccag
tccttctcccgctccggcatccccaagaacaccgacttcaactacgacttcttcagcgag
ctcagcctcaagggttacgtcgctgcctccggccgcggcaccgtctccggcaccgcctcc
ggcatcaccggcagcttccagcgtgttgtccactggtacaacgccaacgcccagtactgg
acctacgcctcgtccaccggcgcctttacctcccctctgatgaagcccggcacctacacc
atggtcctctaccagaccgagttcaaggtggccaccagctccgtcaccgtctccgctgga
aagactaccactgccaacatcgccagcaccctcgctgcccgcaccaccctttggaagatt
ggcgagtacgacggccagcctaccggcttccgcaacgccgacaagcagctccgcatgcat
ccctctgacagccgcatgagcagctggggtcctctcacctacaccgtcggcacatctgcc
gtcagcgacttccccatggcaatcttcaccgccgtcaacaaccccgtcaccatcaagttc
aacctcgcttccgcccctggcgctgccaccctccgcatcgccaccacccttgcctttgcc
agtggccgcccccaggccaaggtgaacagctggaccggcccggcccctgctgcgcccacc
aaaattgactctcgtggcgttactcgtggtgcgtaccgcggcctcggcgaggtctacgac
gtcagcatccctgccggcaccctcgtttcaggagccaacaccatcaccatcaatgtcatc
tccggcagcagtggtgacacttacctgagccccagcgtcatcttcgacaccgttgagctc
ttccagtaa
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