KEGG   Colletotrichum lupini: CLUP02_17386
Entry
CLUP02_17386      CDS       T08561                                 
Name
(RefSeq) RNA polymerase Rpb8
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
clup  Colletotrichum lupini
Pathway
clup03020  RNA polymerase
clup03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:clup00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CLUP02_17386
  09124 Replication and repair
   03420 Nucleotide excision repair
    CLUP02_17386
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:clup03021]
    CLUP02_17386
   03400 DNA repair and recombination proteins [BR:clup03400]
    CLUP02_17386
Transcription machinery [BR:clup03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CLUP02_17386
  RNA polymerase III system
   RNA polymerase III
     CLUP02_17386
  RNA polymerase I system
   RNA polymerase I
     CLUP02_17386
DNA repair and recombination proteins [BR:clup03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CLUP02_17386
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG LON_substr_bdg NB-ARC
Other DBs
NCBI-GeneID: 73351308
NCBI-ProteinID: XP_049137522
UniProt: A0A9Q8WAQ4
LinkDB
Position
10:complement(join(580943..581048,581110..581456))
AA seq 150 aa
MSGSGDVTLFEESFTVTNYDQSKYDRVARISATSTDNQTLMTLDINIELFSASVSDSLHM
VLATSLAHDGSKDDEKGWRDVTKGTQDREPSLADMFDYVCYGKIYKFEDADDGQTIKAYV
SFGGLLMSLEGPYKKLTPLRVDYVYLLIKK
NT seq 453 nt   +upstreamnt  +downstreamnt
atgtctggcagcggcgatgttaccctcttcgaggagtccttcacggtcaccaactacgac
cagtccaagtacgacagagtcgcccgtatctcggccacctcgaccgacaaccagacgctc
atgaccctcgacatcaacattgagctattctctgcctccgtttccgacagcctgcacatg
gttctggcgacttctctggcccacgatggcagcaaggacgacgagaagggatggcgggac
gtgaccaagggcacccaggaccgtgagccatcattggctgatatgttcgattacgtctgc
tacggcaagatctacaaattcgaggacgccgacgatggtcaaactatcaaggcctacgtc
tcattcggaggcctgttgatgtccctcgaaggcccctacaagaagctgaccccgctgaga
gtcgactacgtctacctgcttatcaagaaatga

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