Colletotrichum lupini: CLUP02_17423
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Entry
CLUP02_17423 CDS
T08561
Name
(RefSeq) RNA recognition domain-containing protein
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clup03041
]
CLUP02_17423
03036 Chromosome and associated proteins [BR:
clup03036
]
CLUP02_17423
Spliceosome [BR:
clup03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
CLUP02_17423
Chromosome and associated proteins [BR:
clup03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
CLUP02_17423
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Nup35_RRM_2
RRM_Nup35
RRM_PARP14_3
RRM_5
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
TPR_14
Motif
Other DBs
NCBI-GeneID:
73351343
NCBI-ProteinID:
XP_049137557
UniProt:
A0A9Q8SER0
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All DBs
Position
10:776773..780057
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AA seq
1094 aa
AA seq
DB search
MATLPVGEDKWLDYVAENSRHANDLEKRVHVIELFKHAVEAEPNSVKVWRAYCDYFWSLY
VDSQSYEAGWPDEERRMGCELFSLNAALSLWQQGYEAILFRINDSHELWNRWISLESGLL
ARSRTAEGIRRITFLYTDRLQVPHVTRDSTMQDFSEFLSTYNKAAWEETMQGITANPKSQ
EAKKLTEDRDDYEFKLRQASREGKDEAYRNLLRGYLEWECAQSKRSNKQAEATGDLCRGL
YARALTGTFAFDDTTWNEYVRFLSTSGTYAQSPQGMVDVLRRAVDHCPWSGAIWSRYILT
AEDAKLPFNEIEQIKHKATSNPELYKNGMTALIDMYAAWCGFLKRKAMDLNATDEDVDVA
DMGLRAALESLEEAKHRYSDSYRGDPNFRLERIYIQYLTEKKRNVDEARSEWHKLAEKQL
YADSYDFWLNYYLWEMMVFAANGKDRSPTPSTAAIGLRVPSVATAVLGRAIKRKSLDWPE
RVIDVYVQHCNDYELPSTVRIAIDTVYESRKEVAKRREREAAQAAEYYAAQQEQQNAYAV
QAVDDDASSSSKRKREAETDTADDTTNKRPRSEATEAETALKNQSLKRDRENTSVLVSNL
PAETTKTKIRQYFKEYGHIVDVTDPAIDPSDNTQTVMVEFRTPEEAQSALLRDGKYFGPA
QINVKPGTDLTLFVTNYPPTADKAYIASLFKDCGEILSIRMPSLKGNVRRRFSYVTFRDR
SASAKATAKHGTLLDGKFKLSAMYSDPSRAKKRDGAIEEGRELHVTNLDPAASEDDVHKV
FEKYGTVKRVSIPKNMAGKGHGAAYVEMGTKEEAEKAASGLNNVNFRGNVIAVQVSTPSI
YKRSAAVSKDGASPAPSRDDDGDATMGDSNGDATGLQGGPSRAEIASRTIALLDIPDTVN
DARVKEIVEKVGGFKSFVLQPSHGGAKIEFEDEPSAGRAMLQLDGYVLDGRKLRTGSVEE
LKRAKGEFRTEKIVYGTGGKKQTDKTAAPKKAGTGPAFIPPSTAVKRPVLGGAKRGGLGF
MPKALSVREGGPAANPQPESKVNGAGVETETRKPMKSNADFKALLMSTTTTTNAPKDGES
VGENGSGPVVEDRQ
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctgccggtaggggaggacaaatggttggattacgtcgctgagaacagtcga
cacgccaacgatctagagaagcgcgttcatgtcatcgagctgttcaaacatgccgtcgag
gccgaacccaacagcgtcaaagtctggcgcgcatactgcgattacttttggtccctttat
gtcgacagtcagtcttacgaagcaggatggcccgacgaggaacgccgcatgggctgcgag
ctcttttctctcaacgctgccctctcgctatggcagcaaggctacgaggccatcctattc
cgaatcaacgacagtcacgaactttggaaccgatggatatcactggaaagtgggctgctc
gcacgctcgcgcaccgccgagggaatccgccgcatcacgttcctctacaccgatcgactg
caggttccacatgtaacccgcgacagtaccatgcaagacttttccgagtttttatcgacc
tataacaaagccgcctgggaggagactatgcagggaattactgcaaatccaaaatcacaa
gaggccaagaagttgaccgaggatcgtgacgactacgaatttaagctgcgccaagcgtcc
cgtgagggcaaggacgaagcttaccgcaatctcctcagaggatatcttgagtgggagtgc
gctcagagcaagagaagcaataagcaggcagaggctacgggtgacctctgccggggactt
tacgccagagccttgaccggcacctttgccttcgacgataccacctggaatgaatatgtc
cgctttctatctacctctgggacatatgcacaatcgccccagggtatggttgatgttttg
cgtcgggctgttgaccattgcccgtggtcaggggccatttggtcgcgctacatcctaacc
gctgaagacgccaagctccccttcaacgagatcgagcagatcaaacacaaggcgacgagc
aaccctgagctttataagaatggcatgacggcgctcatcgacatgtacgcggcctggtgc
gggttcctcaagcgaaaggcaatggatctgaatgcaaccgacgaggacgttgatgtcgct
gatatgggcttgcgcgctgcacttgaatctcttgaggaggccaaacaccgttacagcgat
agctacagaggcgatcctaatttccgtctggagcgcatctacattcagtatctaaccgag
aagaaacgcaacgtcgacgaagcgagaagcgagtggcacaagctggccgaaaagcagcta
tatgccgatagctatgacttctggctgaactactacctttgggaaatgatggtgtttgcc
gccaacggcaaagaccgcagcccaacaccgtccaccgcggcgattggcttaagagtgccg
tcggtggctacagctgtcctcggaagggccatcaagcgtaagagcttagactggcctgag
agggtcattgacgtttacgtccagcactgcaatgactacgagctccccagtacggttcgc
attgctattgacacggtctacgaatcccgcaaggaggtcgccaagcggcgagagagagag
gcagctcaagccgctgagtactatgctgctcagcaagaacagcaaaatgcctatgcagtt
caagcggtggatgatgacgcgtcttccagctctaagaggaagcgggaagcggagactgat
acagccgatgatactaccaacaaacgacccagaagtgaggccacagaggccgagacagcc
ttgaagaatcagagcctcaaaagggatcgagagaacacatcagttctcgttagcaacctt
cctgcggaaacaaccaagaccaaaatacgccaatacttcaaagagtacggccacattgtc
gacgttacggaccctgccattgacccttcagacaacacccagacggtcatggtagaattc
aggaccccggaggaggctcaatcggctctgctccgagacgggaaatacttcggaccggcc
caaatcaacgtcaaacccggaactgatctgaccctcttcgtcaccaactacccgcccaca
gcagacaaggcctacatcgcaagcctcttcaaggattgcggcgagatactgagtatcagg
atgcccagcttgaagggtaacgttcgccgacgcttcagctacgtgacatttcgcgatcgt
tcggcttctgctaaagcaactgcaaagcatggtactcttctcgatggaaagttcaaatta
tcggccatgtactctgatccgtcccgtgcgaagaagcgtgatggcgccatcgaggaaggc
agagaacttcacgtcaccaatctcgaccctgcggccagcgaggatgacgtccataaggtt
ttcgagaaatacggaactgtgaagcgcgtcagcatcccgaaaaacatggcaggtaaaggc
catggagcagcctatgttgaaatgggaaccaaggaggaggccgagaaggctgcttctggg
ctgaacaacgtcaacttccgcggcaacgtcatcgccgtacaagtgtcaacacccagcatc
tacaagaggtcagcggctgtttcgaaagatggcgcatctccggcgccaagtcgagatgat
gacggagacgcgacgatgggagacagcaatggtgatgcgactggccttcaaggtgggcca
agtcgcgccgagatcgcctcacggaccatcgcacttttagatatcccagacactgtcaac
gacgcgcgggtgaaggaaattgttgagaaggtggggggcttcaagagcttcgttctccag
cctagtcatggtggcgccaagatcgagttcgaagacgaaccaagtgccggtcgcgccatg
ctccagctcgacggctatgttttagatggtcgtaagttgcgaaccggatctgttgaggag
ctgaaacgggcaaaaggagaattccggacagagaagattgtgtacggtactggcggcaag
aagcagactgacaagactgcggcaccaaagaaggctgggaccggccctgcctttatccct
ccttccacggctgtcaagcggccagtcttgggcggtgccaagaggggaggattgggtttt
atgcccaaggctttgagcgtgagagagggtggccctgccgcaaatccacaaccagaatcc
aaagtcaatggcgctggtgtggaaacagagactcggaaaccgatgaagagcaatgccgac
ttcaaggctctgcttatgtctacaactactacaactaatgcgcccaaggacggagaaagt
gtgggggaaaatggcagtggtccggtcgtggaagaccgtcaataa
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