Colletotrichum lupini: CLUP02_17979
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Entry
CLUP02_17979 CDS
T08561
Name
(RefSeq) DNA-dependent RNA polymerase
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
clup
Colletotrichum lupini
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
clup03029
]
CLUP02_17979
Enzymes [BR:
clup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CLUP02_17979
Mitochondrial biogenesis [BR:
clup03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
CLUP02_17979
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
Motif
Other DBs
NCBI-GeneID:
73351893
NCBI-ProteinID:
XP_049138107
UniProt:
A0A9Q8SGG7
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All DBs
Position
10:2760235..2764398
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AA seq
1387 aa
AA seq
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MLLRNSRRSLSLHHATIFRSSRPTPRYPLTTINASDRSNRLFGTQNDGRPTARRGSLSGG
RNLATAVDDHQSIASSNYDRLDSSVLSAYQNVSARPRYHELRAFDPASPLVLQESNAPQQ
PRGKINNFGVPGDVDELLPIFDACIRVGKVDRAQMVLKRLAAVPSFPGEDLIFLHNRFIR
ASLEQLRLHPDRKQAESLHKWYELHINTRGLPQTAETIACMLKASLISERDASRRHRLVT
RYMRLAPGEAGLQVLSMAEILSDQDLAVITEICPIYNLAPEEDTSAAEVNDEHVAVEESE
ALSSASAKPMPQVMATPQKGFGLKSLKQTLSLFDEIPQECDISTLPLRERREIQARLERD
CVDAAVERWREENESLQKMGLNTSVAHASLNSRLYDWQLALEARLKEEMVKIEKSEAVAK
KTPEDYDRCVYGPFFRLSTPSRLAAVTILSTLSSTAITGVDRGMGLATAISGLAKLTEED
IRSQLASQRVKKADKSRKVVMAKPAEVADDKSSKEVASNELFSDEQAREAVLADAAWPPA
VKAKVGAALMSALIETAKIKVVREHPETKTLVSQFQPAFSHATQLRRGKKIGMILLNKEL
VNIMKREPQGDFLAKHLPMVVEPEPWQAFDKGGFLESKASLVRIKQGDKDQRLYSEAAIA
RGDMDQVFKGLDVLGRTPWRINNSVLSVMLDVWNSGEELANIPALNPDIPTPPEPAPSED
PSERILWIRAVKAAENERGGLHSVRCFMNFQLEIARAFRNQTFYFPHNIDFRGRAYPLPT
YLNHMGADHVRGILRFAKGKELGEQGLKWLKVHLSNVFGFDKASLNDRAAFTMDNLANVI
DSATNPLNGNRWWLKAEDPWQCLAACFELKAALESPEPEKYVSSLPVHQDGTCNGLQHYA
ALGGDIWGARQVNLVPGDKPADVYSAVANIVKDHIAKDAEGGNPFAKAMDGKITRKVVKQ
TVMTNVYGVTFAGAKKQVCKQLDSLYPNLPKECGFENIVTASYVATLVFKALSSMFRGAH
DIQYWLGEIGGRVCRALSAEQLERIANDGIVPVLSKTKAVENRTSTDELLAQFRATIVWT
TPLRMPIAQPYRKSGTRIIKTSLQDLSLTIPERSDPVHRKKQLQAFPPNFIHSLDATHML
LSALECSELGLDFAAVHDSFWTHAADVNTMNRVLRDAFVRIHEEDVVGRLAAEFEARYRG
SIYMAKINVGTDVEKKIAALRKKKKVSFKDELLAEHKRQTLLRSGDPELIAEAKEMVTPA
SIFEEMAATEALVKGEDLKAIGLGEISEDADETDVKMDSGAGDEANDAETSHAVNEELLS
GASSRFATKMLKNMEESHFKQHLLAKPGKSTSRPKTIQVWLPLTFPPIPEKGDFDVQRLK
ESEYFFS
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgctcctcaggaacagccggagaagtctttcccttcaccacgcaaccatcttccgatcc
tctcgaccgacaccaagatacccattgacgacaataaacgcgagcgacagaagcaaccgt
ctttttggcacacagaacgatggacggcccacggccagaagaggtagcctcagcggcgga
cggaatcttgccaccgccgtagatgaccatcaatccatcgcgagctccaactacgacaga
ctggacagttctgtcctgtcagcataccagaacgtctcggctcgcccgagataccacgag
ctgcgcgccttcgaccccgcctcgccactggtactccaagagagcaacgcaccgcaacaa
cctcgggggaaaataaacaactttggcgttcctggcgatgtggacgaactgttgccgata
ttcgatgcctgcatccgtgtcggcaaagtcgatcgtgcacaaatggttctcaagcgcttg
gctgctgtcccaagcttccctggcgaagacttgattttcctccacaaccgattcatccga
gcctccctcgagcagttgcgcctccatcccgaccggaaacaagccgagagccttcacaaa
tggtacgaattgcacatcaacaccaggggcctccctcaaactgccgagactatcgcttgc
atgctcaaggcctctcttatctccgaacgcgacgccagcaggcgtcaccggctggtcact
cgctacatgagactggcacccggcgaggcgggcttgcaagtcttatcgatggccgagatc
ctgagcgaccaagacctcgcagtcattacggaaatctgccccatatacaacctcgcgcct
gaagaggatacttcagccgctgaagtcaatgatgagcatgttgccgttgaagaaagtgaa
gctttgagttccgcttccgcgaagcctatgccgcaagtcatggccacacctcagaaaggc
ttcggactgaagagtttaaagcagactctgagccttttcgacgaaatccctcaagaatgc
gacatctccacacttccccttcgcgaacgaagggagatccaagcccgcctcgagcgcgac
tgtgttgacgcagctgtagagcgatggcgcgaggagaacgaatctctacagaagatgggc
ctcaatacttcggtagcccatgcatcactcaactctcgcttgtacgactggcaacttgca
ctggaggcgcgactgaaggaggaaatggtcaaaatcgagaagtccgaggccgtcgcgaag
aagacgcctgaagactacgaccgatgcgtgtacggacccttcttcagactttctacgcct
agtcgtttggccgctgtcaccattctcagcaccttgagttccactgccatcactggtgtc
gaccgtggcatgggtcttgctaccgccattagcggcctcgcaaaactcaccgaagaggat
attcgaagtcaactcgcgagccagagggtgaagaaggctgataagagcagaaaggtcgtc
atggctaaacctgcggaggttgcagacgacaaatcatcaaaagaggtggccagcaatgaa
ttgtttagcgatgaacaagccagagaagctgtgctagccgatgcggcctggccccctgcg
gtgaaggctaaggtcggcgcggccttaatgtctgctctcatcgagactgccaagatcaaa
gttgtgagggagcatcccgaaacgaaaaccctcgtcagccagttccagccagcgttctct
cacgctactcagctcaggaggggcaagaagatcggcatgatcttgctcaacaaggagctc
gtcaacatcatgaagcgagaacctcagggagacttcctggctaaacatctacctatggtc
gtggagccggagccgtggcaggccttcgacaagggtggctttttggaaagcaaagcgagt
cttgttcgtatcaagcagggcgacaaggaccagaggctgtacagcgaagcagcgatcgcc
cgcggagacatggaccaagtgttcaagggattggatgtcctgggcagaaccccttggcgg
attaacaactcagttctcagcgttatgcttgatgtttggaacagtggcgaggagttagca
aacatcccggcattgaaccccgatatcccgacgccgcccgagcccgcgccctctgaggac
ccctctgaacgcatcctctggatcagagctgtcaaggccgccgaaaacgagaggggtggc
ttgcattccgttcgctgcttcatgaacttccagctggaaatcgcccgtgctttcaggaac
caaactttctacttccctcacaacattgacttccggggtcgtgcctacccactaccgaca
tacctcaaccatatgggtgccgaccatgtccgtggcattcttcgctttgctaagggcaaa
gagctcggcgagcaaggtctaaagtggctcaaggttcacttatccaacgtgttcggtttc
gataaggccagcctcaacgacagagcggcgttcactatggacaacttggccaatgtcata
gactcagccaccaatccgcttaatggcaaccgctggtggctcaaggccgaggacccttgg
caatgtcttgcagcttgtttcgagctcaaggcagcccttgaatctccggaaccagagaaa
tacgtctctagccttccagtgcaccaagacggcacttgcaacggtcttcagcactatgcc
gccctcggtggtgacatttggggtgctcgccaagtcaacctcgttcccggcgataagcct
gctgacgtctactctgccgttgccaatattgtcaaagaccacattgccaaggacgcggag
ggaggcaatcctttcgcgaaggctatggacggaaagatcacgagaaaggtggtcaagcag
accgtcatgaccaacgtttacggtgtcacattcgccggtgccaagaaacaggtctgcaag
cagcttgattcgctgtaccccaacttgccgaaggagtgcggcttcgaaaatatcgttact
gcatcttatgtggctactctcgtcttcaaggctctgtcgtccatgttccgcggtgctcac
gatattcagtactggctcggtgagattggcggccgggtttgcagggctttgtccgctgag
caattggagcggatcgcgaatgatggaatcgtacccgtgctgtcaaagaccaaggccgtc
gagaatagaacctcaactgacgaactcctggcacaattccgcgccactattgtctggacc
acaccgctacgcatgcccatcgcccaaccgtaccgcaagagcggaacccgaatcatcaag
acgtccctccaggatctctccctcacaattcctgagcgctccgatcccgtacaccgcaag
aagcagctgcaagcattccctcccaactttatccactccctcgatgcaacgcacatgctg
ctgtccgcgctggagtgctctgagcttggactggactttgctgctgttcacgactccttc
tggacccacgccgctgacgtcaacacgatgaaccgtgttcttcgtgacgccttcgtcaga
atccacgaggaggatgttgttggccgtctcgctgccgagtttgaggctcgttaccgcggc
tccatctacatggcaaagatcaatgtcggaaccgacgtcgagaagaagattgcagccctg
agaaagaagaagaaggtgtcattcaaggatgagcttctggctgagcacaaaagacagacg
ctcctgcgctccggggaccccgagctgattgcggaggccaaggagatggtcacacccgct
agcatttttgaagagatggcggctaccgaagcccttgtgaagggcgaggacctgaaggcc
atcggcctcggtgagatttcggaggatgcggacgagaccgacgtcaagatggattcaggt
gctggcgatgaagccaacgatgctgagacatctcatgccgtcaatgaagagctcctcagc
ggagccagctcccgattcgccacgaaaatgctgaagaacatggaagaatcgcacttcaag
caacatctgctcgctaagcccgggaagtcgacctcacgtcctaagacgattcaggtctgg
cttcctttgaccttccccccgattcccgagaagggcgacttcgacgttcagagactcaag
gagagtgaatacttcttctcatga
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