Colletotrichum lupini: CLUP02_18087
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Entry
CLUP02_18087 CDS
T08561
Name
(RefSeq) S4 domain-containing protein
KO
K02986
small subunit ribosomal protein S4
Organism
clup
Colletotrichum lupini
Pathway
clup03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CLUP02_18087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
clup03011
]
CLUP02_18087
Ribosome [BR:
clup03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
CLUP02_18087
Bacteria
CLUP02_18087
Archaea
CLUP02_18087
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-GeneID:
73352001
NCBI-ProteinID:
XP_049138215
UniProt:
A0A9Q8SFZ4
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All DBs
Position
10:complement(join(3175711..3176709,3176794..3177345,3177500..3177541))
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AA seq
530 aa
AA seq
DB search
MRGRKPRWYNLAKPKIRQSWNKYNLFNLATFKLKRNRTSRTFFQQKWTAKSMTRGYHGAH
VKEAEWSRNFSRRLFSAVDMPPEYLAKHDGSEHSAGRGSGLHAEPGSEDLTPTAYHFSKL
EEARQRREADNRFARVKADPQTEMLARPVREMTPYMQMAFAPLERRLDVAIFRAMFASST
LQAKQFCTHGAVKVNGKVMRYGAYKLNPGDMFQVDVDNVLFATGRAKTPNHALWLAGKDY
QSLNDAGKPNKSAAKEGASEQESGDAALEAAEVDAAVEEVDAAAESGEAATEAAEAAADG
EEGSQLSEEEKSKQLQKQLKSLVRSVKTFLSDKDGLKPSKKRQLRTFMAEAKRVLSTSGR
VTDDAVATLDHEGVMNNLTALLKDFKLEGNKVEAVASPEAEGQEQAADHSKPTSAKEKAE
TEAVTDLISSKDVRNALSGLSKAEQKAFAELLRKHAENPIDESKPYWTPWQPRRYMSPFA
FIPRYLEVNQNICAAVYLRHPVARRGLAEVPTPFTYETNQLAFNWYLRRG
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtagaaagccaaggtggtataacctggcgaagccaaagattcgtcagtcatgg
aataagtacaatcttttcaacctcgccacattcaagttgaaacgaaaccgaacctcgaga
accttcttccagcagaaatggacagccaagtcaatgacccgtggctaccacggcgcgcac
gtcaaggaggcggaatggtcacgcaacttctcccgccgcctcttctccgccgtcgatatg
ccgcctgagtacctcgccaagcacgacggatcagagcactcggccggccgcggttccggt
ctgcacgccgagccgggatcagaggacctcacgccaaccgcataccatttctctaagctc
gaagaagccaggcaacggagagaagctgacaacagatttgcaagagtcaaagctgatcct
cagaccgagatgcttgcccgtcccgtccgggaaatgacgccctacatgcaaatggctttc
gcccccctcgagcggaggctggacgttgccatcttccgcgcaatgttcgccagcagtacg
ctccaggcaaaacagttctgcacacacggcgccgtcaaggtcaacggcaaagtcatgcgc
tacggtgcctacaagctcaaccccggcgacatgttccaggtcgatgtcgacaatgttctc
ttcgccaccggtcgggccaagacccccaatcacgcactctggctcgctggcaaagactat
caatccctgaacgacgccggcaaacccaacaaatccgcggctaaagagggcgcgtcagaa
caggaatctggcgacgcagcgctcgaggctgccgaagtcgatgccgccgtcgaagaagtt
gacgccgccgcagaaagcggcgaggccgccaccgaagcagcagaagcagcggccgatggg
gaggagggaagccagctctctgaggaagaaaagtccaagcagctccaaaagcagctcaag
tcgctcgtccgctcagtcaagaccttcctcagcgacaaagacggcctcaaacccagcaag
aagcgccagcttcgcaccttcatggccgaagctaagcgcgtcctctccacctcgggccgc
gtgacagacgacgccgtcgccacactcgaccacgagggcgtgatgaacaacctcaccgcc
ctgctcaaggacttcaagctcgagggcaacaaggtcgaggctgtcgcctccccggaagca
gagggtcaggaacaagcggccgaccactccaagccgacgagcgccaaagaaaaggcagag
accgaggcggtcacggaccttatctcctcaaaggacgtccgcaacgcgctcagcggcctc
agcaaggccgagcagaaagcctttgccgagcttctgcgcaagcatgccgagaaccccatt
gacgagtctaagccctactggaccccctggcagccgcgccgctacatgtcgccctttgcc
ttcatcccgcgctacctcgaggtgaaccagaacatttgcgccgccgtttacctccgtcac
cctgtcgcacggcgcggtctggccgaggtgcccacacccttcacctacgagacgaaccaa
ttggcgttcaactggtacctgaggaggggctga
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